KEGG   Chenopodium quinoa (quinoa): 110716744
Entry
110716744         CDS       T05764                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03013  Nucleocytoplasmic transport
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110716744
  09122 Translation
   03013 Nucleocytoplasmic transport
    110716744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110716744
   03041 Spliceosome [BR:cqi03041]
    110716744
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110716744
Spliceosome [BR:cqi03041]
 Complex C
  Other components
   EJC/TREX
    110716744
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110716744
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 eIF2A Nup160 IKI3 PROPPIN
Other DBs
NCBI-GeneID: 110716744
NCBI-ProteinID: XP_021751070
LinkDB
Position
Unknown
AA seq 319 aa
MAQQKAEDATHPFKNLYSREYQGHKKKVHSVAWNCIGTKLASGSVDQTARVWHIEPNSHG
KVKDIEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDARSGKCSQQAELSGENINIT
YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV
LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
VRTISFNHTGEYIASASEDLFIDIASIETGRSIHQIPCRAAMNSVEWNPKSNLLAYAGDD
KNKYQADEGVFRIFGFQSA
NT seq 960 nt   +upstreamnt  +downstreamnt
atggcgcagcagaaagcggaggatgcaacacacccttttaagaatctctacagtagagaa
tatcagggtcacaaaaagaaggtgcattcagtggcttggaattgtattggaactaagctt
gcttcgggttcggttgatcaaacggctcgagtttggcacattgaacctaatagtcatgga
aaggtaaaggatattgaatttaaggggcacactgatagtgtggaccagctctgttgggat
cccaaacacgcagatctacttgcaactgcatcaggggataaaacagttcgtttgtgggat
gctcgcagtggaaaatgctcacagcaagcagaacttagtggtgaaaatattaacattaca
tacaaacctgatggggcacacatagctgttggaaacagggatgatgaactaacaattcta
gatgttagaaaatttaagccaattcacagacgcaagttcaattatgaggttaatgagatt
gcatgggacatgactggagagaagttctttctgacaactggaaatggtactgttgaagtc
cttgcatacccctctttgaaggcacttgacactcttacggctcacactgctggttgctat
tgtattgcgattgatccactaggaagatattttgctgttggaagtgctgactcattggtc
agtctttgggatattaaagagatgctatgtgttcgaacatttgtaaaactcgagtggcct
gttcgaacaataagttttaatcacactggagaatatattgcttcagccagtgaagattta
tttattgacatagcaagcattgaaactggacgatctatccatcaaataccttgtcgggcg
gcaatgaatagtgttgaatggaatccaaaatcaaatttgcttgcatatgctggagatgat
aaaaacaaataccaagccgatgaaggtgttttccgcatattcgggttccagagtgcttag

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