Chenopodium quinoa (quinoa): 110716979
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Entry
110716979 CDS
T05764
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03015
mRNA surveillance pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110716979
09122 Translation
03013 Nucleocytoplasmic transport
110716979
03015 mRNA surveillance pathway
110716979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110716979
03041 Spliceosome [BR:
cqi03041
]
110716979
03009 Ribosome biogenesis [BR:
cqi03009
]
110716979
03012 Translation factors [BR:
cqi03012
]
110716979
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110716979
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110716979
mRNA cycle factors
Stress granule specific factors
110716979
Spliceosome [BR:
cqi03041
]
Complex C
Other components
EJC/TREX
110716979
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
90S particles
Helicases
110716979
Translation factors [BR:
cqi03012
]
Eukaryotic type
Initiation factors
eIF-4
110716979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
Helicase_RecD
CMS1
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
110716979
NCBI-ProteinID:
XP_021751317
UniProt:
A0A803MKD4
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MASGSVVPANRGRRNLTDDEKLQFEATEGIEPVTSFERMGIKDDLLRGIYAYGFEKPSAI
QQRAVMPIIQGRDVIAQAQSGTGKTSMISLAVCQMVDTSTREVQALIVSPTRELASQTEK
VIMAIGLHMNIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRNIKLL
ILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEITNKFMTDPVKILVKRD
ELTLEGIKQFFVAVEQEDWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTV
SSMHGDMPQKERDAIMKEFRDGDTRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHR
IGRSGRFGRKGVAINFVKKDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggttcagtagttccggcaaatagaggaagaagaaacctaaccgatgatgaa
aagctacagttcgaagcaacagaaggtattgaacctgtaacaagcttcgaaagaatgggg
attaaagacgaccttttacgtgggatctatgcttatggtttcgagaagccttctgctatt
caacagcgtgctgttatgccgattattcagggtcgtgatgttattgcgcaagctcagtct
ggtactgggaaaacttccatgatttctctcgctgtttgtcagatggttgatacttctact
cgagaggtccaagcattaattgtgtcacctactcgggagctggcttcgcaaacagaaaaa
gttataatggccatcggtctccacatgaatatacaagcccatgcatgcatcggagggaaa
agtgtgggtgaggatatcaggaaattggagtatggagttcatgttgtttctggaacccca
ggtagagtgtgtgatatgatcaagaggagaacactgagaacccgaaacatcaaactctta
attcttgatgagtctgatgagatgttgagcagaggttttaaggaccaaatttatgatgtc
tatcgttaccttccaccagagcttcaggttgtgctgatctctgccaccctccccaatgaa
attctggagatcacgaacaaatttatgacagatcctgttaaaatcctcgtgaaacgtgat
gaattgactttagagggcatcaagcaattcttcgttgcagttgagcaggaagattggaag
tttgataccctttgtgatctttatgataccctcacaattactcaagctgttatcttttgc
aacactaagcgaaaggtggattggctgactgagaagatgagaaacaataacttcactgtt
tcatcaatgcatggtgatatgccccagaaagagcgagatgctattatgaaagaattccgt
gatggcgacactcgtgttttgatcacgacagatgtttgggctcgtggaattgatgtccaa
caggtttcattggtaatcaactacgatttacctaataatcgtgaactttatattcatcgg
attggtcgctctggtcgttttgggcgtaagggtgttgctattaactttgtcaagaaggat
gatatcaagattctaagagacattgagcaatattacagtacccaaattgatgaaatgccg
atgaatgttgctgatttgatatga
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