Chenopodium quinoa (quinoa): 110717144
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Entry
110717144 CDS
T05764
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110717144
03036 Chromosome and associated proteins [BR:
cqi03036
]
110717144
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110717144
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
110717144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
TPR_19
ARM_TT21_5th
xRRM
TPR_15
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
110717144
NCBI-ProteinID:
XP_021751474
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MDYRVPGMLLPYSKIVNFSFRSLSRKKKLLIPLSLSEKARVTNLITFLPFKNLEMAEPAE
LEAMSENPEELNSSNDGEPRDAIDATAAKASTDNFHSDSDSDDENEAQQAQELKILESEL
SRNPSNYDAHVQYIKLLRKMGEIDKLREARESMSQIFPLTPTMWQEWAKDETTLCSGPEA
VPAIEKIYERGVSDYLSVPLWCDYLNFVQEHDLSIRECSASGVSKARNLFERALTAAGLH
FCEGSKIWEAYKEFEQAICLTIDDSDIEGKEKQIQRVRNIFHRQLSVPLADMNSTLLAYK
VWEVQQGNDLDVNSSDLEGISSHVASAYKKALEMCDARNILEEQISKSDVPDTERIPLFK
KYLKFEESAGDPARVQILYERLITEFPICSDLWIDYTRYLEKTLKVGNVVNNVISRATSN
CPWIGELWVRQLLCLERAHASEDEISLVFEKALQCSFSSYEEYLELFLTRIDGLRRRISV
SGELQVLDYAVIRDVFQRASDYLSLHLKGTDALLRLHAYWVHLELTLANDIVAARGVWES
LLKISGTMLEAWQGYIKMEIDKGNLNEARSLYRRCYTKRFPGSGSQDICQSWLWFEREFG
TLADYDYAVQKVSPRLEELQVFDLQQDSKTIVTAGDVSEHPSKKNAREKRKPASNLLEDQ
SPSKRLKEAFKEGTKKIHNKDVSRTATVEETEANINKMDSTSSNEQLKKQTMHGKAMYTD
QCTAFISNLDPKANYEDLRKFFSDVGGVQSIRILKHRDTGKSRGLAYVDFSDDAHLDAAV
GKNRQWLLKKKLSIARSDPSRNKNQSAIRHEVDRDGSKIPSGDQPRTDRNNSSELSVDQS
SSSKGHDIDRVQLKGKNTFAVPRNVRPLGFKAIKPKDEGDDEKPKSNDEFRNLLLKK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggactatagagtaccaggtatgttactcccgtattctaaaatagttaacttctcattc
cgctctctctctcggaaaaaaaaacttctcattccgctctctctctcggaaaaagctcgg
gttacaaatttgataaccttccttccttttaaaaacctggaaatggcggaaccagccgaa
ttggaagcgatgtcagaaaatcccgaagagctcaattccagcaacgatggtgaaccaaga
gatgccatcgatgctacagcagctaaagcatcgaccgacaacttccactccgactccgac
tctgatgatgaaaatgaagctcaacaagcgcaggagctcaaaatcctggaatcggaactc
tctcgtaatccctctaattacgatgctcatgttcagtacataaaattgctcaggaaaatg
ggtgagattgataaactcagggaagctagggaatcgatgagccagatttttcccttaaca
cctacaatgtggcaagagtgggctaaagatgaaactactttgtgttctgggccggaggct
gttccagctattgaaaagatatatgaacgcggtgtatctgattatctgtctgtccctctt
tggtgtgactacttaaattttgtgcaagaacatgatctctcaatccgcgagtgttctgct
tctggtgtttcaaaggcaagaaacttgtttgagcgtgctcttacagctgctggcttgcat
ttttgtgaaggcagtaaaatatgggaagcctacaaagaatttgagcaagctatatgcctt
acaattgatgattctgacatcgagggaaaagaaaagcaaattcagcgtgttcgaaatatt
tttcacaggcagctatctgttcccttggccgacatgaattcaactcttcttgcgtataag
gtttgggaagtgcagcagggaaatgatcttgatgttaactccagtgacttggaaggaatt
tcttctcatgttgcttctgcttataagaaggcattggagatgtgtgatgctcgcaacatt
ctggaagaacaaatttctaaatctgatgtaccagatacagaaagaattccactcttcaag
aaatacttgaaatttgaagagtctgcaggtgaccctgcacgagttcagattctatatgaa
cgtttgatcactgagtttcctatatgcagtgatttgtggatagactatactcgctattta
gaaaaaacgctcaaggttggaaatgttgtaaataatgttatcagtagagccacaagtaat
tgcccctggattggggaactctgggtgaggcagttgctttgcttggaacgagctcacgct
tcagaggatgaaatttccctggtatttgagaaggcccttcaatgttcattttcaagttac
gaggagtacctggaattgtttcttactcgtattgatggtttacggagaagaatttcagta
tctggtgaattgcaggtcttggattatgctgtaatcagagatgtgtttcagcgtgcatca
gattacttatctttacatctaaaaggcacagatgctttgttgcgtcttcatgcttattgg
gttcatttggagctgaccctggcaaatgatatagttgctgctcgcggagtttgggaaagc
ttactgaaaattagtggcaccatgcttgaggcttggcaaggttatataaagatggagatt
gacaagggaaatctgaatgaagcaagatcattatatcggaggtgctatacgaagagattt
cctggttcaggttcacaggacatatgccaatcttggttatggtttgagagggaattcggc
actctggcggattatgactatgctgttcaaaaggtttcaccacgtttggaggaattgcag
gtatttgacttgcagcaagatagcaaaactattgtgactgctggagatgttagtgaacat
ccctccaagaaaaatgctcgtgaaaaacgaaaaccagcttcaaatttgctggaggatcaa
tctccttcaaaacgactgaaagaagccttcaaggaagggacaaaaaaaattcacaacaaa
gatgtttcccgaacagccacagtggaagagactgaagcaaatattaacaaaatggatagc
actagcagcaatgaacagcttaagaagcaaaccatgcatggaaaggcaatgtacacagat
caatgcacagcattcatatctaaccttgatcccaaagcaaattatgaagatcttcgcaaa
ttctttagtgatgtcggtggagttcaatctatccgaatattaaagcatagggatactggg
aaatcaaggggtcttgcatatgtggattttagtgatgatgcacaccttgatgctgctgtg
gggaagaacagacagtggttactgaagaagaaattaagtattgccagatcagatccttct
agaaacaaaaatcaatcagccatacgacatgaagttgacagagatggttcaaagattccg
tctggggatcaaccaagaaccgatagaaacaattcttctgagctgtctgttgatcagtca
tcttctagtaagggccatgacattgatcgagtccaactcaagggaaagaatacatttgca
gttccacgcaatgtgaggcctcttggatttaaagcaatcaagccaaaagatgaaggagat
gatgagaaaccaaaatctaatgatgaattcagaaacttgctgcttaaaaagtag
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