Chenopodium quinoa (quinoa): 110717321
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Entry
110717321 CDS
T05764
Name
(RefSeq) sister chromatid cohesion protein SCC2-like isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110717321
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
110717321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
HEAT
PHD_2
PHD_3
zf-PHD-like
Nop52
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
110717321
NCBI-ProteinID:
XP_021751673
LinkDB
All DBs
Position
Unknown
AA seq
1768 aa
AA seq
DB search
MSTNFSDWTQRGVTLSNTLHSEVAPCLPLPSLPPFCGASDEQLRLFDDHLSRPLNRRDIF
AQAPKIADLLLHTDVSYLILKNDASSGSGSTMAPMDLCEEVLRCNRDAFECTLPGPLEER
ISNVESDRNIYEKNEHVSCQVDGDREEGHMRHHAHVVDDAPSSSKKTRAKKKGTQGVSSS
ALPDFSEQRDAMIGRFCDFLEDFCSRAEIPGEEREESEWLMLPTSDIRMVVKEILTIREE
KLVHRVPVDFLVRLLTVLDHQIHRAEGLSIDECENSDSDVSSILCALESIHAALAVMAFN
DMPKQLYKEEIIERILEFTRRQVMDMMSAYDPSYRALHRPGDNRVAEGEDDPDVEAEFGS
ASKKRRITKSVKVKRTMASRIPAAVNTVFQKLCTILGLLKDLLLVERLSDSCILQLVKTC
LSTFLVDNIQLLQMKAMSLISGVFYSYTQHRSYVVDEVIQLLWKLPFSKRAARAYHLPEE
EQKQIQMITALLLQLVLHSANLPEALRQTSSTSAIFETTIETNYLVQCNEAATEACVSFW
THVLERLTSKSQEASEVKVIMENIVVDLLTTLNLPEYPAASLILEVLCVLLLQNAGPKSK
DISIRSLAIDILGTIAARLKHESVLCHSDNFWIVQELLGRESVNENEQTDTCSVCLGGVV
EKALVICQGCQRPFHSDCVGFREHDISTRGWQCPCCLCKKQLIVLQSYCKSQIKDDSKNN
HNRSENLSDESASKMEIVQQMLLNYLEDMGSSDDLHLFARWLYLCLWYKDDPKNQQQSCY
RLARLKSKAVIRDSGALSSMLTRDSIKKITLCLGQNNSFSRGFDTILGMLLVSLRDNSPV
IRAKALRAVSIIVEADPDVLRDKRVQLAVEGRFCDSAISVREAALELVGRHIASHPDVGL
QYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNVEFVESAPACIEIISRISDEESSIQDLV
CKTFYEFWFEEPAGRQYFADDSSVPLEVARKTEQIVDMLRKMPNHQPLVTIIKRNLALDF
LPQSKGTGVNPVLLATVRKRCEMMCKFSLERILQVEEMNSEEGELRILPYVTVLHAFCVV
DPSLCAPASNPSQFVVTLQPYLKNQVDNRVMAQLLESVIFIIDAVLPLLRKLPQSVVEEL
EQDLKQMIVRHSFLTVVHACIKCLCSLNKIAGGKGARLIQFLIQVFEKRLDALGVDNKQQ
VGRSLFCLGLLIRYGSTLLRESTEGVDIGSSISLFKKYLLADDFGIKVRALQALGFLLIA
RPECMLEKDTGKILAATLSSSCDARLKLQALQNMYDYLLDAESQLGSDTVEDNVVDCSHD
GGSVVPVAAGAGDTNICGGIVQLYWNHILERCLDTNEQIRQSGLKIVEVALRQGLVHPIT
CVPYLIALETDPLEVNSKLAHHLLMNMNEKYPAFFESRLGDGLQLSFNFIRSMNENSVNS
SSKIQFNVAENKGKHEDASFANARIGVSRIYKLIRGNRVSRNKFMSSVIRKFDNPSWSET
VVPFLMYCTEILALLPFTTPDEPLYLIYTINRVNQVRSGTLEASLKAESHFSQRSLHKVL
TENGSVLQELPVGSLSASSVSFELNGQVEVPEDGHFHSTVNEETVHTTTGPCVLAEDDQQ
RIQALCLAATALQLLLKLKRHLKIMYNLDDVRCQAFSPADPPKSGEALSRQNIPFTIGVI
NVNMPSTSEELTQRYQEFKNALKEDTVDYSAYTANIIKRKRPTSKRGGKASRMISREDED
EDDNEDWTGGRRNQSGRQSNGVRASRRL
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaatttcagcgattggactcaaagaggcgtcactctctccaacactctacac
tccgaggttgcgccttgcttacctctgccgtctcttccgccgttttgcggtgcttccgat
gagcagcttcggcttttcgatgatcacctctctcggccgctaaatcgccgtgatatcttt
gctcaagctccgaaaatcgctgatctcttgcttcatactgatgtttcctacttgattctt
aaaaatgatgcgagttcaggttctggttctacaatggcgcctatggatctttgcgaggag
gttttacgatgcaatcgtgacgccttcgagtgtacacttccaggtcctcttgaagagcga
atctctaatgtggagtctgatcgcaacatttatgagaagaatgagcatgtatcctgtcaa
gttgatggagaccgtgaagaaggacacatgcgccatcatgctcatgttgttgatgatgca
ccttcatcatctaaaaaaacaagagctaagaagaaaggaacccagggagtgtcatcatct
gctttgccagatttcagtgaacaaagagatgctatgattgggcgattctgtgattttttg
gaggacttttgcagtagggctgagattcctggtgaagagcgagaagagtcggagtggtta
atgttacccacctctgacattcgtatggtcgtgaaggagatattgactatcagagaagaa
aaattggtacatcgagttcctgttgactttcttgtgagactattgacggttttagaccat
cagattcatcgcgctgaaggcctatcaattgatgaatgtgaaaattcagattctgatgtt
tcatcgattctctgtgctttggagtctatccatgccgctctggctgtaatggcttttaat
gacatgccaaagcaactatataaggaagagattattgagagaattctcgagttcaccaga
cgtcaggtcatggacatgatgtcagcttatgatccatcatatcgcgctttgcatagacct
ggtgataacagagttgctgaaggggaagatgatccagatgtcgaggctgagtttggttct
gcaagcaaaaaacggcgtataactaaaagtgtaaaagtgaaaagaactatggctagcagg
attccagctgctgtgaacactgtgtttcaaaagctttgtactatccttggtcttctcaag
gacctcttgttagttgaacgcctctcagacagctgtatcttgcagcttgtgaaaacgtgt
ttgtcaacatttttggttgacaatattcaactcttgcaaatgaaggctatgagcctgatc
agtggggtattctattcatacactcagcataggagctatgttgttgatgaagtaattcaa
cttctatggaagcttccattctcaaaaagagctgccagagcatatcatttacctgaagaa
gagcagaagcagattcaaatgattactgctttactgcttcagttagttctccatagtgct
aatcttcctgaagccttgagacaaacatcaagtaccagtgccatctttgaaactactatt
gaaacaaactaccttgttcaatgcaatgaggcagccacagaggcatgcgtttcattttgg
acacatgtacttgagcggcttacaagtaaaagtcaagaggcatccgaagtgaaggtgata
atggagaatattgtggttgatctgctaactacattgaatctgccagagtaccctgctgct
tccctcattttagaagttctctgtgtcttgttgcttcagaatgctggtccaaaatcaaaa
gatatttctattcgctcattggcgattgatattcttggtacaattgctgcacggttaaag
catgagtctgtactttgccatagtgataacttttggatagttcaggagctgttaggtagg
gaaagtgtaaatgagaatgaacagacagatacatgctctgtttgcttaggtggagtagtc
gaaaaagctttagtgatatgtcaaggttgtcagagaccatttcattctgattgtgtgggg
ttcagagaacatgacatctctacacgtggttggcagtgcccttgctgtctctgtaaaaag
caacttatagtgttacaatcatactgcaaatctcagatcaaggatgatagcaaaaacaat
cataatagatcagaaaatttgtctgatgagtctgcttcaaagatggagattgttcaacag
atgcttcttaattaccttgaggacatgggctcatctgatgatcttcatctttttgcccgt
tggttgtatctctgcctctggtacaaagatgatccaaaaaatcagcagcagtcctgctat
cgccttgccagattgaaatccaaagcagttattcgtgattctggggccttgtcatcgatg
ttaaccagagattccattaaaaagataactttgtgtcttggacagaataattcattttcc
agaggatttgatactattcttggcatgcttttggttagtctacgagacaattcacctgta
attagggctaaggcattgcgtgctgttagtataattgtagaggctgatcctgatgtcttg
cgtgataagcgtgttcaacttgctgttgaaggaaggttctgtgattctgcaatatctgtt
agagaggctgctttagaacttgttggaaggcatatcgcatctcatccagatgttgggttg
caatattttgaaaaggttgcggagagaattaaggatactggggtaagtgttcggaaacga
gcgatcaaaattatccgagatatgtgtacatcaaatgttgagtttgtggaatctgcacct
gcttgcattgagatcatttcccgtataagtgatgaagaatcaagtattcaggatcttgtg
tgcaaaacattttatgaattctggtttgaagaacctgctgggagacagtactttgcagat
gatagttctgtgccgttagaggtggctagaaagactgaacagatagttgacatgttaagg
aagatgcctaatcatcaacctcttgtcactattatcaaacgcaatttggctcttgatttc
ttgcctcagtcgaagggaactggggttaatcctgtattactggcgacagtgcgcaagcgt
tgtgaaatgatgtgcaaattttcacttgaaagaattttacaggtagaggaaatgaactct
gaggaaggggagttgcggatacttccttatgtgacggttttgcatgctttttgtgtcgtg
gatccgtcactctgtgcacctgcctccaatccttcccagtttgttgtcacactgcagcca
tatcttaagaatcaggttgataatcgagttatggcccagcttttggaaagtgttatattt
ataattgatgctgttcttcctttactgcggaagttgcctcaaagtgtagttgaagaactc
gagcaggatctgaagcagatgattgttcgtcattcctttttgacagttgtacatgcttgc
atcaagtgtctttgctctttgaataaaattgctggtggaaagggagctaggttaattcag
tttctgattcaggtgttcgaaaagcgtttggatgctcttggtgttgataacaaacagcag
gttggcaggtcactgttttgtcttgggcttctgatccgctatggtagcaccctgttaagg
gaatctactgaaggtgttgatattggtagcagtatcagtttatttaagaagtatcttcta
gctgatgattttggtataaaggtcagagctctgcaggcactgggatttcttttgattgct
agacctgaatgcatgttggagaaggatactggaaaaattttagctgcaacgctgtcttcc
agctgtgatgctcgtctgaagctgcaagctctgcagaatatgtatgattatctccttgat
gctgaaagtcagttgggctcagatacagttgaagataatgtggttgactgctcccacgat
ggtggttctgtggtgcctgttgctgcaggtgctggtgatacaaacatttgtggtggaata
gtgcaactttattggaaccatatcttggaaagatgcttggacacaaatgaacaaattcgc
caatctggcctgaagattgtggaagttgctctgcgccaaggtcttgtacacccaattact
tgtgttccgtacctcattgctctggaaacagatcctttggaggtgaactcaaagttggca
caccatctgctaatgaatatgaatgagaagtatccagctttctttgagagccgccttggt
gatggactgcagttgtcatttaattttatacgatcaatgaatgagaattctgtaaattca
agttctaaaatccaattcaatgttgctgaaaataagggaaaacatgaggatgcatcattt
gcaaatgcgagaataggagtttctcgtatatacaaacttatacggggaaaccgtgtttct
agaaataagttcatgtcttcggttattcgcaagtttgataatccaagctggagtgaaaca
gttgtccctttcttgatgtactgtacggaaatccttgctttgctccctttcacaacccct
gatgagcccctttacttgatttacaccataaacagagtgaatcaagttagatctgggaca
ctggaagcaagtctaaaagctgaatcccatttctcccagcgaagtttgcataaggtcctg
acagaaaatgggagtgttttgcaagagttacctgttgggtctctctctgcatcttctgta
tcttttgagttaaatggacaagttgaggttcctgaagatgggcattttcattctacggtg
aatgaagaaactgtgcacacaactactggaccttgtgtcctcgcagaagatgatcagcag
agaatacaggctctctgtcttgcagctacggcacttcagcttctcttaaagttgaagagg
cacttgaagattatgtacaacttggatgatgttcgatgccaagcattttcacctgctgat
cctcccaaatctggagaggccctttccagacagaatattccttttaccattggtgtcata
aacgttaatatgccctctacgtctgaagagttgacccagagatatcaggaattcaagaat
gcactgaaggaagatactgttgactactcagcctacacagcaaacattattaaaaggaaa
cgcccaacctccaaaagaggaggtaaagcaagccgaatgataagcagggaggatgaagat
gaagatgataatgaagattggactggagggcggaggaatcaaagtggccgacaaagcaac
ggtgttagagcaagcaggcggttgtag
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integrated database retrieval system
