Chenopodium quinoa (quinoa): 110718096
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Entry
110718096 CDS
T05764
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi00040
Pentose and glucuronate interconversions
cqi01100
Metabolic pathways
Module
cqi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110718096
Enzymes [BR:
cqi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110718096
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
DUF7460
Motif
Other DBs
NCBI-GeneID:
110718096
NCBI-ProteinID:
XP_021752589
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All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MGRTFTFFFFTLSLLNCALIIAAKGVGGALYNVATFGAKPDGKTDSTKAFVDAWAAACGS
TGRPTIHVPQGRFFISNAITFNGARCKNKGVNFNIKGTLVAPSNYRVLGNKGTWLAFQYV
TGVSISGGVLDGQGDGLWACKVAGKGGCPSGLTNIGFTSSKNIAIKGLTSLNSQLYHIVF
VGCQNVKVQGTKVSASGSSPNTDGIHVQSSTGVTIRSTTIGTGDDCISIGAGTTNMWMEN
IKCGPGHGISIGSLGKEMNEPGVQNITVKTATFTGTQNGVRVKSWGRPSNGFVKDVLFQH
ITMVNARNPIIIDQNYCPGNKGCPGKVSGVKIDSITYQDIHGSSASPVAIHFDCSAKNHC
TGLRLENIKLTYNNNKPASSMCAFAGGSSYGLVQPKGCL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggggagaacattcacattttttttctttacactttctctcctaaattgtgctcttatt
attgcagccaaaggagtagggggcgcattgtacaatgttgccacattcggggcgaaaccc
gatgggaaaacggactctaccaaggcgtttgtggatgcatgggccgccgcttgtggatcc
acagggcggcccacaattcacgtgccccagggccggttttttattagtaatgccattact
ttcaacggagctagatgtaagaacaagggtgttaactttaatattaaaggcacccttgtt
gcaccctcgaattatcgagttcttggcaacaagggtacttggctagcttttcaatatgtc
accggagtgtcgatctccggtggagtgttggatggtcaaggtgatggtttgtgggcttgt
aaggtggccggcaaaggcgggtgcccaagtggactcacgaatattgggttcacaagctcc
aaaaatattgcgatcaaaggattaacctcgctaaacagccaattataccacattgtattt
gttggttgccagaatgtgaaagttcaaggcacgaaagtttcagcctccgggtcgagtcct
aacaccgatggaattcatgtacaatcatcgactggtgtaacaataagaagtactactatt
ggtaccggagatgattgtatctcaattggcgccggaaccacgaatatgtggatggagaac
atcaagtgtggacctggtcatggtatcagcattggaagtcttggcaaagagatgaatgag
cccggagtacaaaacataacagtgaagacggcaacatttaccggtactcaaaacggtgtc
cgagtcaagtcttggggaagacctagcaatggctttgtaaaggatgtattgttccaacat
attactatggtcaatgctcgaaaccccattattattgaccaaaattattgccctggaaac
aaaggttgtccaggaaaggtctcaggagtaaaaatcgacagcataacataccaagatata
cacggatcatcagcttctccggttgctatacattttgattgtagcgcgaaaaaccattgt
acagggctaagattggagaacataaagcttacctacaacaacaacaaaccagcctcctca
atgtgtgcctttgctggtggatcaagctatggattagttcaacctaaagggtgtttgtag
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