Chenopodium quinoa (quinoa): 110718508
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Entry
110718508 CDS
T05764
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110718508
Spliceosome [BR:
cqi03041
]
Common components
Common spliceosomal components
General mRNP proteins
110718508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
110718508
NCBI-ProteinID:
XP_021753038
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MDFDEYDYLEKTVENPEPQKSKEAANGGDDLVKSGEKERSRSSRRRGEDTEDEDRKSKRS
RSGDDARERDRDQDPDRNREKRSSRHRSRSKERERSEKDGERRRSSRGDRDKDRDREERN
GRDRDRDRDRERERERDRDSGKKERDREKEGERDRDERDRRSRSHSIRHREDGERTRDKE
YREKSRDREIVEKSREKERERSHDRDIHDKERRRHKEKKDDTTEPEADPERDQRTVFAYQ
LPLRADERDIFEFFSRAGKVRDVRLIMDRNSRRSKGVGASILYFRNISVLLVQFLKTVVI
LSYIEFYDVMSVPMAIALSGQLIRGQPVMVKPSEAEKNLVQSTSSTAAGLTVSGAARRLY
VGNLVPNITEEQLRVVFESFGIIELVQLPRDEAGLCKGFAFVQFARLEDAKAAQVLNGQL
DIGGRVMKVSAVTDQPGMQDAGATTGDLDDDEGGGMALNASSRALLMQKLDRSGNSTGVG
GSLASSAVNTGALSVVSAPMPGVAPGVSPLTQPSVVPLGGLPGAGLSAPLGTLSMADTIG
VPSECLLLKNMFDPKLETEPDFDLDIKDDVQDECEKYGPLKHIFVDKNTEGFVYLKFDNT
QSAMNAQRALHGRWFAGKLISATYMLPQDYEAKFPESR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgagtatgattatttagagaagacggtagaaaatcctgagccacagaaa
tcgaaagaagctgccaatgggggagatgacctagtaaaatctggggagaaggaacgtagc
cggagttctcggcgtaggggtgaggacactgaggatgaagatcgcaaatctaagcgctct
agatctggggatgatgcacgtgagcgtgatcgtgatcaagacccggaccggaatagggag
aagcgttcatccaggcatcgatcacgatctaaggaaagagaaaggagcgagaaggatggg
gagaggcgtagaagtagcaggggagatagggataaggatagagatagagaagagagaaat
gggagggaccgtgaccgagatagggatagggaaagagaacgtgaaagagaccgtgattct
ggtaaaaaggaacgtgatcgtgagaaggagggtgagagggacagagatgaacgtgatcga
cgtagcaggagtcattcaattagacatcgggaggatggggagagaactagggataaggaa
tacagagagaaaagccgggacagagagattgttgagaagagccgggaaaaagaaagagaa
agaagtcatgacagagatatccatgacaaagaaaggagacgtcacaaggaaaagaaggat
gacacaacagaaccagaggctgaccctgagcgggatcagagaacagtctttgcttatcag
ctccctctaagggcagatgaaagggacatttttgaatttttctctagagctggaaaggtt
cgagatgtacggctcattatggaccgtaattctagacgttccaaaggagttggtgcatca
attctctactttaggaacatctctgtgctattggttcaatttctaaaaactgttgtgatc
ttgagctatatagagttctatgatgtaatgtcagttcccatggctatagcactctctggg
caacttatccgtggacaaccagtcatggttaaaccctccgaagctgagaaaaatctggtc
cagtctacatcttctacagcagcaggtcttactgtttcaggggcagcacgtaggttatat
gttggaaatttggttcctaacattacggaagaacaacttcgtgtggtttttgaatcattt
gggattatcgagttggtgcagttacctcgtgatgaagcaggtctttgtaaaggttttgct
tttgtccagtttgcacgtcttgaagatgctaaggcagctcaagttctaaatggacaactg
gatattggtggtcgggttatgaaggtttcagctgtcactgatcaacctggaatgcaagat
gcaggggcaactactggtgatttagatgatgatgaaggcggtggcatggctttaaatgca
agttctcgagcgcttctcatgcaaaagttggatcgcagtggcaattctaccggtgttggt
ggttcacttgcctcttcagctgttaatactggagctctttctgtggtttctgcaccaatg
cccggggttgctcctggagtttctcctctcacacagccttctgtagttcctcttggagga
ttgcctggtgctggtctttctgctcccctaggcactctttcaatggctgacactataggt
gtccccagtgagtgtctattgttgaaaaatatgtttgatccaaagctagagactgaacct
gattttgatcttgatataaaggacgatgtgcaagatgaatgtgagaaatatgggcctttg
aagcacatctttgtagacaagaacactgaaggatttgtatacttgaaatttgacaacacc
caatcagcaatgaatgcacaacgcgcactacatggcagatggtttgcagggaagttgatt
agtgcaacatacatgctaccacaagattacgaggctaaatttccggagagcagatga
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