Chenopodium quinoa (quinoa): 110718521
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Entry
110718521 CDS
T05764
Name
(RefSeq) pre-mRNA-splicing factor syf2-like
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110718521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110718521
Spliceosome [BR:
cqi03041
]
Complex B
Other components
Prp19-related factors
110718521
Complex C
110718521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
110718521
NCBI-ProteinID:
XP_021753058
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MDRERGVHPDCRNASNPYHECVEYCFKKIAESKARFSETDKEVTGASGSQAKLDAAAPDE
IELSYNEVETHKDADNADDNPEEATMEEVDLSKLTGRQKKLFELRLKMNEARKANQTAMV
AEKKRMEAPTESRGVSKEKWLEERKKKVGRLLEANGLDMTKAYMLDTQDAAELKYKKWEK
DPAPTGWDVFNQKSLYNAYKKRTKNIAVDLEEYNKLKEQDPEFYREASSLQYGKDPKTSE
AKIDRMVKELKDRDEKRQSFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKYTLEIKNN
LERGTALPD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggaaagaggtgttcatccagattgcagaaatgcatcaaacccttaccatgaa
tgcgttgagtattgcttcaagaagattgccgaatccaaagctcgtttctccgaaaccgac
aaagaggttacaggagctagtgggagccaagccaagcttgatgcagctgctcctgatgaa
attgaattatcatacaatgaagtagaaacacataaagatgctgataatgctgatgacaat
cctgaagaagctactatggaagaagttgacttgtctaaacttacagggagacagaagaag
ttatttgaattaaggcttaagatgaatgaagccagaaaagccaatcaaacagctatggtg
gcagagaagaaaagaatggaagctcctactgagtcaaggggagtgtccaaagagaaatgg
cttgaagaaaggaagaaaaaggttggcagacttctggaagctaatggtttggacatgaca
aaggcatacatgttggatacgcaggatgcagcagagttgaaatataagaaatgggagaaa
gatccagctccaactggttgggatgtttttaatcaaaagtcattgtacaatgcatacaag
aagcgcaccaaaaatatagcagttgaccttgaagaatacaacaagttgaaagaacaggac
cctgagttttatcgagaggcgtccagccttcaatatgggaaggatccaaagacatctgaa
gctaagattgatagaatggtcaaggagcttaaggatagagatgagaaacggcaatcattt
agcaggaggaggaagttccgtgaagagaaggatattgactctatcaatgaccgtaatgag
catttcaacaagaaaatcgaacgggcatttggaaaatatacactggagatcaagaacaat
ctggaaagaggaactgcattgcccgactga
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