Chenopodium quinoa (quinoa): 110718533
Help
Entry
110718533 CDS
T05764
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110718533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cqi04121
]
110718533
Enzymes [BR:
cqi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110718533
Ubiquitin system [BR:
cqi04121
]
Ubiquitin ligases (E3)
HECT type E3
110718533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
ARM_ARMC5
Arm
HEAT_EZ
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
110718533
NCBI-ProteinID:
XP_021753072
LinkDB
All DBs
Position
Unknown
AA seq
1879 aa
AA seq
DB search
METRSRKRAEASSSAPSSSSVGPTTRAAKRTRLSSSSSSTTTTPATRSRTRSNVTVTPVT
MDESSSRGGRRGRNHGSDKDNDKGKEKEHEVEKERENELGMNVFDDDDDDNDNDDSEGGG
GVGLLHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSASSSSHQSGRLKKILSGLRADG
EDGKQVEALTQLCELLSIGTEDSLSTFSVDSFIPVLVGLLNHESNPDIMLLAARAITHLV
DVLPSSCAAVVHYGAVNCFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVL
SYLDFFSTGVQRVALATAANMCKKLPSDAADFVMEAVPHLTNLLQYHDAKVLEHASVCLT
RIVEAFASSSDKLDELCNHGLVTQAASLISTSNSGGGQASLSTSTYTGLIRLLATCASGS
TVGAKTLLLLGISGILKDILAGSGLVGNMSVSPALSRPPEQIFEIVNLANELLPPLPQGT
ISLPASSNLFVRRPLFKKSPMSSSGKQDETNGNVQDVSAREKLMNDQPELLQQFGIDLLP
VLIQIHGSSVNGPVRHKCLSVIGKLMFFSSAEMISSLNSTTNISSFLSGVLAWKDPQVLV
PALQIAEILMEKLPETFSKMFVREGVVHAVDSLIASPSNSISAQTATPEKDSESALGTSA
RARRLRRRSGNQQQDANSLEELRNSVSVNVGSPPTSVEIPTASSNLRTTVSGCAKSFKDK
FFPSDLGTVDVGISEDLLHLKNLCAKLNASVEEQKSKVKGKSKTASAYVADFVTGKEESL
VGIVYEMLAELSKGDGVSTFEFIGSGVVAALLNYFSCGYFNKEKISEVNLPKLRQQALKR
YKLFISIALPSSSSGGNDTPMTVLVQKLQNALSSLERFPVVLSHSARSSGGSARLSSGLS
ALSQPFKLRLCRAPGEKSLRDYSNTVVLIDPLASLAAVEDFLWPRVQRSESGQKASTSVG
NSDSGPSPTGAGASSPAASTPAASTRRQSSRSRSGINIGDYSKKDTSQDKTTSSSKGKGK
AILKPSPEESKGPQTRNAARRRAASDKDAQIKSPTGESSSEDEDLELSPVDIDDALVIED
DDISDDDDDDDQDDVLRDDSLPACMADKVHDVKLSDSAEDGAAAPATSDSQNNPASGSSS
RAATVRGSDSTDFRSGSSFGSRGAMSFAAAAMAGLASNGRGIRGGRDRHGRPLGGSSDPP
KLVFSAGGKQLNLNLTIYQAIQRQLVTDEEDDERYNGSDLVTSDGSRLWSDIYTITYQRA
DSQVEKPHGAVNSASPSKSTKSGAASASNAVAASHRSPLDSILQGELPCDMEKNNPTYNV
LSLLRVLEGLNQLAPRLRVQTASDKFSEGMISDLNELTVAGARVLTSEFVNSKLTPKLAR
QIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQFFYSTAFGLSRALYRLQQQQGEGQG
SSEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFY
TLLSHDLQKVDLKMWRTSSFDKSSMEIDSDNQSKDGKSEDASGLNYGENANLVQSPLGLF
PRPWPPSADASESSHFSKVVEHFRLLGRIMAKALQDGRLLDLPLSTAFYKLVLGQELDLH
DILSFDPEVGKTLRELQALVCRKQYLESIGGDHPDVIAELCFRGTPIEDLCLDFTLPGYP
DYVLKPGDENVDINNLEEYISLVVDATVKSGIIRQLEAFRAGFNQVFDVTSLQIFSPDEL
DCLLCGRRELWKPDMLVDHIKFDHGYTAKSPAIVYLLEIMGEFTPEQQRAFCQFVTGAPR
LPPGGLAVLSPKLTIVRKHSSTTTTASNGTGPSETADDDLPSVMTCANYLKLPPYSTKEI
MFKKLLYAINEGQGSFDLS
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgcagccggaagcgggcggaggcgtcctcatcagccccttcttcgtcgtct
gtaggtcccacaactcgcgccgcgaaacgcactcgtctttcttcttcctcctcgtctacc
accactactccggcaactcgctctcgaactcgctctaacgtaactgtgacccctgtaacg
atggatgagtcgtcgtcccgtggcggccgaagaggtagaaaccatggttctgataaggac
aatgataagggtaaggagaaggaacatgaagttgagaaagagagggagaatgaattaggg
atgaatgttttcgatgacgacgatgatgataatgacaatgatgatagtgaaggaggaggt
ggtgtggggcttttgcatcagaatcttacctctgctagcagtgcccttcagggtttgttg
cgaaaactcggtgctgggctcgatgatttgctcccgtcatctgctatgggttcggcctcc
tcttcgtcacaccagagtggaaggctcaagaagatactttctggattgagggctgatggt
gaggatgggaagcaggttgaagcattgactcagttgtgtgagttgctgtcaattggtact
gaggattcactcagtacattctctgtggattcgtttattcctgtgctcgtggggttgctt
aatcacgagagtaatcctgatataatgcttcttgctgcgagggcgattactcacttggtt
gatgtattgccttcttcttgtgctgctgttgttcattatggcgcggtcaattgtttctgt
gctaggctgctgacgattgaatatatggacttggctgagcagtctctgcaagcactaaag
aagatatctcaagagcacccaactgcgtgtttgcgagctggtgcattaatggcagtgctt
tcttatcttgatttcttttcaactggagttcagcgagtggcattagctactgctgcaaat
atgtgcaagaagctcccttcggatgctgctgattttgtaatggaagctgttcctcaccta
actaatctccttcagtatcatgatgcaaaggttctagagcatgcttctgtttgccttact
cgaattgttgaggcctttgcttcatcttctgataagcttgatgagctttgtaatcatggt
ctggtcacccaggctgcttcgcttatttcaaccagtaattctggtgggggccaggcctcc
ttgagcacgtctacttacacaggtttgatccgacttcttgctacatgtgcaagtgggtct
actgtgggagccaagacgttgctgttgctaggtataagtggaattctcaaagatattttg
gccggatctggacttgtgggaaatatgtctgtatcccctgctcttagcaggcctccagag
cagatatttgagattgtcaaccttgcaaacgagctgcttcctccacttccgcaaggaacc
atctcccttccagcaagctccaacttgtttgtaagacgacctctttttaagaagtcacct
atgagcagttctgggaagcaagatgagacaaatggaaatgtgcaagatgtgtcagcaaga
gaaaaactcatgaatgatcagcctgagcttctacagcaatttggaattgaccttcttccc
gttttgatacagattcatggatcaagtgtgaatggtcctgtccgtcacaaatgcctttct
gtgattggtaaacttatgtttttcagcagtgcagaaatgatatcatctctgaatagcaca
acaaatatatcaagttttctttctggtgttttggcttggaaggatccacaagtattagtt
ccggctctacaaattgcagagatactgatggaaaaactccctgagacattctccaagatg
tttgtgagagaaggtgtagttcatgctgtggattcgctcatagcttctccatcaaactct
atttcagctcaaactgctacccctgaaaaagatagtgagtcagctttaggaacatctgca
cgtgctagacgtttaaggagacgaagtggaaaccagcagcaagatgccaactctctggaa
gagttgaggaattcagtttcagttaatgttggttcgcctcctacatctgttgaaattcca
actgccagttctaatcttcgcacaactgtcagtggttgtgcaaagtctttcaaggataag
ttcttcccttctgatcttgggactgttgatgttggtatttcggaggatctcttgcacctg
aagaatttatgtgcaaagctgaatgctagtgttgaggagcaaaagtctaaagtgaaagga
aaatcgaagactgctagtgcttacgttgcagattttgtaactggcaaagaggagagctta
gttggaattgtttatgagatgctagcagaactaagcaaaggggatggtgtttctacgttt
gaattcattggcagtggggttgttgcagccttactgaactatttttcctgtggttacttt
aataaagagaaaatttcagaggtgaatcttcctaagcttagacagcaggcactcaaaaga
tataagttgtttatctccattgcccttcctagtagtagcagtggagggaatgatactcct
atgactgttttagtccaaaagcttcaaaatgctttatcctcactggaaaggtttccagtt
gtattaagtcattcagctaggtcatcaggtgggagtgcacggctttcatcaggtttaagt
gcactttctcagccatttaagttgcgtctatgtagagctccaggagagaagtctcttcgt
gattactctaatactgttgtactcattgatccattagcaagtttagcagctgttgaggac
ttcctttggccccgagttcaacgaagtgaatctgggcagaaggcgtccacttctgtggga
aattctgactcagggccttcacctacaggagctggtgcttcatcaccagctgcctccacc
cctgctgctagcactcgccgccagtcatccagatccaggtcaggtattaatatcggggac
tattcaaaaaaagatacttctcaagacaaaactactagctcgtcaaaggggaagggcaaa
gctatattaaaaccatcaccagaggaaagtaaaggtcctcaaacaagaaatgctgctcgt
aggagagctgcttcagataaagatgcccaaataaaatcacccactggagaatctagttct
gaggatgaagatttagagttgtctcctgttgacattgatgatgcattggtaattgaagat
gatgatatctctgatgatgatgatgatgacgaccaggatgatgtactgagggacgattct
cttcctgcttgtatggctgataaagtgcatgatgtgaaattgagtgattctgctgaagat
ggtgctgctgcccctgcaaccagtgatagtcagaataatcctgcttcaggttctagtagt
agagctgccactgtaagggggtcggattctacagattttcggagtgggagttcttttggc
tctaggggtgcaatgtcatttgcagctgctgccatggctgggcttgcttctaacggaaga
ggaattaggggaggcagagatcgtcatggacgtcctcttggtggttccagtgaccctcct
aagttagttttctctgctggtggcaagcaacttaatttgaacttgacaatctatcaggct
atccagcgacagcttgtgaccgatgaagaggatgatgagaggtacaatggtagtgatctt
gtgactagtgatggtagcaggctatggagtgatatttatacaatcacctatcaacgggct
gatagccaggttgaaaagccccatggggctgtgaattctgcctctccatcaaagtccacc
aaatctggagctgcttccgcttcaaatgctgttgctgcctcacaccggtcacctctggac
agtattttgcaaggggaacttccctgtgatatggagaaaaataatccaacctataatgtt
ttgtcactgcttcgtgtactggaaggtttgaatcaacttgcccctcgtttgagggttcaa
acagcttctgataaattctcagaagggatgatttcagatctaaatgagttgactgttgct
ggagctagggttcttacttcagaatttgttaacagcaaactcacccctaaattggctaga
cagatacaagatgcgcttgcattatgcagtggtagtctgccgtcttggtgctaccagctg
acaaaagcatgtccatttttgtttccttttgaaactcgtcggcagtttttctattcaact
gcatttggattgtctagggccttgtatcgtttgcagcaacaacagggtgagggtcaaggg
tctagtgaaagggaagttcgagttgggaggctacagcgccagaaggttcgtgtttcacga
aatcgcattttagattctgcagcgaaagtcatggaaatgtattccagccagaaggctgtc
cttgaagtagagtattttggtgaggttgggacaggattaggtccaacgttggagttctac
acccttttgagtcacgacctgcagaaagtggatttgaaaatgtggagaacaagttcattt
gacaaatcttctatggaaattgatagtgataatcagagcaaagacggtaaatctgaagac
gcctcaggattgaattatggggaaaatgcaaatcttgttcaatcccctcttggtttgttt
cctcgaccgtggccgccaagtgctgatgcttcagagagcagccatttcagcaaagttgtt
gaacattttcgacttcttgggcgaatcatggccaaagctcttcaagatggaaggctgttg
gatcttccattatcaacagcattttacaaacttgtgcttggacaggagcttgatttgcat
gatatcctttcatttgatccagaggttgggaaaactttacgagaattacaagccttagtc
tgcagaaaacagtatttagagtcaataggtggtgatcatccggatgtaattgcggagttg
tgctttcgtggaactccaattgaggatctatgtttagattttacgcttcctggatatcca
gattacgtcttgaaaccaggggatgaaaatgtggatatcaataatttggaggaatacata
tcattggtggtggatgccactgttaagtctggaattattaggcaattggaagcttttagg
gcagggttcaaccaggttttcgacgtcacatctttacagatattttctccagatgaacta
gattgcttgctttgtggccgtagagagttgtggaagcctgatatgcttgttgatcacatt
aaatttgatcatggatacacagccaaaagccctgccattgtttatttgcttgagattatg
ggtgagttcacaccagaacagcaacgtgcattttgtcaatttgtcactggtgcgccacgt
cttccacctggtggtttggctgtgcttagccccaagttgacaattgtgaggaagcattct
tcaaccaccaccacagcttcaaatggaacagggccttcagaaactgcggatgatgatttg
cctagtgtcatgacctgtgctaattaccttaagcttcctccttactcgacaaaggaaatt
atgttcaagaagttgctttatgctatcaacgaaggacaaggatcatttgatttgtcatga
DBGET
integrated database retrieval system
