Chenopodium quinoa (quinoa): 110718750
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Entry
110718750 CDS
T05764
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110718750
09123 Folding, sorting and degradation
03018 RNA degradation
110718750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110718750
03041 Spliceosome [BR:
cqi03041
]
110718750
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110718750
mRNA cycle factors
Stress granule specific factors
110718750
Spliceosome [BR:
cqi03041
]
Complex C
Other components
Complex C specific factors
110718750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_occluded
Nup35_RRM
RRM_3
DUF5062
Motif
Other DBs
NCBI-GeneID:
110718750
NCBI-ProteinID:
XP_021753342
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MAQPQVQANGGAPAATAAAVGGGAAAPAGGAAAAAAGQFVTTSLYVGDLDVNVSDSQLYD
VFNQLGQVVSVRVCRDLATRRSLGYGYVNYANPQDAARAIDVLNFTPLNNRPIRIMYSHR
DPSVRKSGAGNIFIKNLDKAIDNKALYDTFSAFGTILSCKIATDLSGHSKGHGFVQYETE
ESAQKAIEKLNGMLLNDKQVYVGPFQRRQERENSVDKTKFTNVFVKNLAEATSDDDMNKI
FSQYGKITSAVVMRDADGKSKCFGFVNFENADDAAIAVEALNGQTVDGKDWYVGKAQKKS
EREAELKNQFEQSMKEVVDQYQGKNLYIKNLDDTIDDDKLKEAFAPYGTITSCKIMRDPT
GVSKGSGFVAFSTAEEASRALLEMNGKMLVSKPLYVALAQRKEDRRARLQAQFSQMRPVA
MPPSVGPRISVYPPGGPGLGQQMYYGQGPPAMLPHQPAFGYQHQMMPGLRGAPVPNFFMP
MVQQGQQGPRPSGRRGGGGPVQQSQQPIMMQQQMMPRGRYHRYPPARPLPDAPIPGVTGG
VLPGGQFDMGGMQMRESAMSPTVPVGTLATLLANATPEHQRLLLGENLYPLVEQLEPDMA
AKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRNVTQQQPSNPADQLAAMSLNDNL
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacctcaggtgcaagcgaatggcggggctccggcggctactgcggccgcagta
ggcggtggtgcggcggctcctgctggtggggctgcggcggcggctgcgggacagttcgtt
acgacgtcgttgtatgtgggtgatttggatgtgaatgtgagtgattcacagctgtatgat
gtgttcaatcaactgggtcaggtggtttcggttagggtttgcagggatttggctactcgt
cgatcacttggttatggttatgtcaattatgctaacccacaagatgctgcaagagcgata
gatgtcctgaacttcactcctctcaacaacaggcctatcaggataatgtattctcaccgt
gatcctagtgtccgtaaaagtggggctggaaacatttttatcaagaatttggataaggcc
attgacaacaaagcactgtatgacaccttttctgcttttgggaccatcctgtcttgcaag
attgctactgatttatctgggcattcaaaaggacatggttttgtgcagtacgagactgag
gagtctgctcaaaaagccatagagaagctgaatggcatgctgttgaatgacaagcaagtc
tatgtgggcccttttcagcgaaggcaagaaagagaaaattccgttgacaagaccaaattc
acaaatgtttttgtgaaaaatcttgcagaggcaacatcagatgatgatatgaataagatt
tttagtcaatatgggaaaattacgagtgctgttgtgatgcgtgatgcagatggaaagtca
aaatgctttgggtttgtcaactttgaaaatgcagatgatgctgctattgctgtggaggct
ctaaatgggcagacagttgatggtaaggactggtatgttggtaaagcccagaaaaagtca
gaaagggaagctgagctgaagaatcaatttgagcagagtatgaaagaggtggtagaccaa
tatcagggaaaaaacctgtacattaaaaatttggatgataccattgacgatgacaaactc
aaagaagcatttgctccatatggcacgattacttcatgcaagataatgcgagatcctact
ggtgtaagcaagggatcaggctttgttgcattttcgactgctgaagaggcatctcgagct
ttgttggagatgaatggaaagatgcttgttagcaagcctctttatgttgcccttgcacaa
cgtaaggaagacagaagagcaaggttgcaggcccaattctctcaaatgcgccctgttgct
atgccaccatctgttggtcccaggatatcagtctatcctcctggtggtcctgggcttggg
cagcagatgtattatgggcaaggacctcctgctatgcttccacatcagcctgcatttgga
taccagcatcaaatgatgcctggtttgagaggtgctccagtgccaaatttctttatgcca
atggttcagcaagggcagcagggtccacgccctagtggcagacgcggaggcggtggtcca
gtccagcaatctcagcagcctattatgatgcagcagcagatgatgccaaggggacgttat
catcgttatcctcctgctcgtcctctgccagatgctcctatccctggtgtcactggagga
gtgcttcctggtggtcaatttgatatgggtggcatgcaaatgcgtgaatctgctatgtct
ccaactgttcctgtcggcacattggctactttgcttgctaatgctactcctgagcatcag
aggcttctcttgggagagaatctgtatccattggtggagcagctggagccagatatggct
gctaaagtgacagggatgctgctggagatggatcagactgaagtcctgcatttgttggag
tctccagatgcgctgaaggccaaggttgccgaagcaatggaagtcttaaggaatgttact
cagcagcagcctagcaaccctgctgatcagcttgctgctatgtcactgaatgacaacctc
tcttaa
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