Chenopodium quinoa (quinoa): 110719038
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Entry
110719038 CDS
T05764
Name
(RefSeq) rRNA biogenesis protein RRP5-like isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cqi03009
]
110719038
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
90S particles
Other 90S particles
110719038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
Suf
HAT_PRP39_C
NRDE-2
CSD
TMEM214
Motif
Other DBs
NCBI-GeneID:
110719038
NCBI-ProteinID:
XP_021753642
LinkDB
All DBs
Position
Unknown
AA seq
1699 aa
AA seq
DB search
MAPLIKRNLKRKSGEQRQHNKPVKSADDKPPSLQFDDDVPDFPRGGGSRLSREERDGIKA
EVDEEFDTELRDSKRTKSKKKKNVRTTIDDDFGSLFGEGISGKLPRFANKITFQNIAPGM
KLFGVVAEVNEKDLAVSLPGGLRGLVRASEAVESALVHSIKDLEGHSLASLYHVGQLVSC
VVLQVDDDDKKETGKKKVWLSSRLSLLHKGYSLDAVQEGMILTANVKSIEDHGYILDFGV
SSFTGFFPKKSNEDAKLTPGQLVQGVVKKIDKVRKVLYLSTDRDIVSKCVMKDLKGISLD
LLVPGMMVDARIQSTLENGIMLSFLTYFTGTVDIFHLQNAFPSSNWKKQYEKNKKVNARI
LFIDPSSRAVGLTMNPHLLLNKAPPSHVRTGEIYEHSKVIRVDKDWGLLLEIPSSPAPTP
AYVTISDVADKDVHKLEKSYREGIDVRVRILGFRHLEGLAMGVLKASAFEGAVFTHADVK
PGMVVKAKVIAVNSSGAFVQFPSGVKAHCPLPHMSEYDIDKPRKKFKVGAELVFRVLGCK
SKRITLTHKKTLVKSKLSILSSYTDATEGLVTHGWISKIDLLGCFVRFYNGVHGFAPRSE
LGLEPRCDTTASYHVGQVVKCRVTSSCHASHRINLSFIISPTKVSEDDAVKLGSVVSGVV
ELVMPNAIYLHVNVKGNMKGTVYIEHLADHQRQSVQLKSVLKPGHELSQLLVLDIEGHNL
ILSAKYSLIHAIPHLPADTSQITLNSVINGYVCNLIETGCFVRFLGRLTGFSPRKKALDD
RNTNLSEAFFVGQSVRCNILEFNNESDRLTLSLKQSHCSSTDTSFLQSYFSTEEKIAALQ
VSNLNSSELDWPQNLNVGSVVEGRINEAKDFGVVISFEKYSDVFGFISQHQMGGKTLETG
STVRAVVLDVSKSERLVDLTLKPEFVEKSERNACAATVAKKKRKRESKEFKLHETVKAVV
EVVKEDYLVLSLPEHNYSVGYAAVTDYNMQRLRRKQFSTGETVVATIMALPSDLTAGRLL
LLLESCNGSLETSISKKAKKRSGYDIGSLVHAEITDIKPLEMWLKFGMGFRGRVHIAEVN
DEIGVEDPFSAYKVGQTLTARIVANSVKPVNNKKGSPWELSLKPSILSGSTEIEKMQMAE
DFNFTVGQHVSGYVYKVDKEWVWLAVSRQVKAKLFILDSACEPSDLENFQKRFRLGAALS
GYILSMNREWKSLRLVMRSFSAISNGLESSASDEKEVCHIHNGDVLGGRVWKILPGVGGI
LVQIGPHIYGKVHYTELADPPVSDPLSGYNEGQFVKCKVLEINYLANSSVHIDLSFRIFE
DTINGDSRSNCIQKIGDLQPDMVVNGYVKSVTPKGCFILLSRNIDAMIKVSNLSDGYVED
PVKEFPVGKLVKGKILSVEPLSKRVEVTLKADNKNSRSELSNFGSLNVGDVVRGRIKRVE
SFGLFIVIDNVNLVGLCHVSEISDDHVDDLDDQFKAGERVTAKVLKVDVERHRISLGMKS
SYFEDEDHGNNEMDVDSVDNSITLVNAKVDMPQVEYSDSTFELEDESALIQVESRASVPP
LEVTLDDMEDDEMFDQLDNKETIANGSNAIDEKSNRQAKKKAKEEKEQQIRAAEQRLLEV
DIPRTSDEFEKAVRSSPNSSFVWIKYMQFMLSMADVEGARSVAERALKTIKITCETEKLN
VWVAYLNLENQYGNPPRRQ
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctttaatcaagaggaatctcaagagaaaatctggagaacaacgtcaacataat
aaacctgttaaatctgctgatgataaacctccttctcttcaatttgatgatgatgttccc
gattttccaagaggagggggaagtaggttgagtcgagaggaaagagatgggattaaagct
gaagtcgatgaagaatttgatacagaattaagggattcaaagaggacgaaaagtaagaag
aagaagaatgttcgtactacgattgacgatgattttggttcgctttttggtgaggggatt
tcaggaaaattacctaggtttgcaaataagattacttttcagaacattgctccgggaatg
aagttattcggagttgtagcagaagttaatgagaaagatcttgctgtaagccttcctggt
ggcttacgtggattagtccgagctagtgaagcagttgagtcggctttagtacatagtatc
aaggatttagagggtcattccctcgctagcctatatcatgtgggccagctcgtgtcatgt
gttgtattgcaagtggatgatgatgataagaaagagacagggaagaagaaggtttggctt
tcatcacgtctttctttattgcacaagggctactctttggatgcagttcaagaagggatg
attttgaccgcaaatgtgaaaagcattgaagatcatggttacattctcgactttggggtg
tcctcttttactggattttttccaaagaaaagtaatgaagatgccaagttgactccaggg
caacttgtgcagggagtagttaaaaaaattgataaagttcgtaaagtactttatctgtct
actgatagagacattgtgtctaaatgtgtgatgaaagatcttaagggtatctcacttgat
cttcttgttcctggcatgatggttgatgctcgaatacagtctactcttgaaaatgggatc
atgttatcatttctaacttattttactggaactgttgatatatttcacctacagaatgca
tttccttcatctaactggaaaaagcaatatgagaaaaacaaaaaggttaatgcccgaatc
ctcttcattgatccgtctagtcgggctgttgggttgacgatgaatcctcatcttcttctc
aacaaggctcctccttcgcatgtcaggacaggagagatatatgaacactctaaagtaatc
agagtagataaagattggggccttttgcttgaaatcccttcgtctccagctcccacacct
gcatatgtgactatttctgatgtggctgataaagacgtccataagcttgagaagtcttat
agagaagggattgatgttcgagtaagaatacttgggtttaggcacttagaagggcttgca
atgggtgtcttgaaggctagtgcatttgaaggtgcagtctttactcacgcagatgttaag
cctgggatggtagtgaaggctaaagttattgccgtcaacagttcgggtgcttttgtgcaa
tttcccagtggtgtcaaggcacattgtcctctaccacatatgtctgaatatgatattgac
aagcctcgcaaaaaatttaaggttggggcggagctagtctttcgtgttcttggttgcaag
tcaaagagaataacgcttactcataagaaaacacttgtgaaatcaaagcttagcattctt
agttcttatactgatgcaaccgaaggattagtgacccatggatggatttcgaagattgat
ttgcttggatgctttgtccgattttacaatggagtacacggatttgcccctagatctgag
cttggtctagagccaagatgtgacacaaccgcaagttaccatgtcgggcaagtagttaaa
tgcagagtaacaagttcatgtcatgcttcacatcgtatcaatcttagctttatcatttca
cctacaaaggtttcggaggatgacgcagtcaagttgggtagcgtggtatccggagtggtt
gagcttgtcatgcccaatgccatatatttacatgtaaatgtaaaaggaaacatgaaagga
acagtatatattgaacatttagctgaccatcagaggcagtctgtgcagctgaagtcagtc
ttgaagcctgggcatgaactttctcagttgctggttctagatattgaaggacacaattta
atacttagtgcaaaatattctcttattcatgctataccacatcttcctgctgatacttca
caaattactctgaactctgtgatcaatggatatgtatgtaacttaattgaaactggatgt
tttgtccgatttcttggtcgtctgaccggcttctccccaaggaaaaaggcactagatgac
agaaacactaatctttctgaagccttttttgttgggcagtctgtacgctgcaatattctt
gaatttaacaatgaaagtgatcgcttaacattgtcactgaagcagtcccattgctcatct
actgatacttccttcctccaatcatatttctcaacggaggagaaaattgctgcacttcaa
gtgtctaatttaaatagctctgagttggattggccacaaaatttgaatgtgggatctgta
gttgagggtagaatcaatgaagcaaaggattttggggttgttatcagctttgagaagtat
agtgatgtttttggttttatttcgcagcatcaaatgggtgggaagactctagaaactggc
tccactgtaagagctgtagttcttgatgtttctaagtcagaacgcctagttgacctgact
ttgaagccagaatttgttgagaaatctgaaagaaatgcttgtgcagctactgtagctaag
aagaaacggaaaagagaatccaaggaattcaaattgcatgaaacagtaaaagctgtagtt
gaagtagtaaaagaggattacttggtactttctttaccagaacataattattctgttgga
tatgcagcggtaactgattataatatgcaaaggttacgacggaagcagttctccactggg
gaaacagttgttgcaactatcatggcacttccaagtgatttaacagctgggagattactt
ctgcttcttgaatcctgtaatgggtctttggagacttcaatttcgaagaaggctaagaag
aggtctggctatgatattggctctctggtccatgcagagattacagatattaaacctctt
gagatgtggttaaagtttgggatgggatttcgtggtagagttcacattgcggaggtaaat
gatgagattggtgtggaagatcccttttctgcgtataaagtggggcagacattgactgcc
aggattgttgcgaatagtgtgaagccagtgaacaacaaaaaaggcagcccatgggaactg
tctctcaaaccatcaattctgtcaggctctactgagattgagaagatgcaaatggctgag
gatttcaacttcactgtaggacagcatgtcagtggctatgtctataaagttgataaagag
tgggtctggttagcagtctctcgacaagtgaaggctaagctatttattctcgacagtgca
tgtgaacctagtgaccttgagaattttcagaaacgtttcaggttgggggctgctctctct
gggtacatattgagtatgaaccgtgaatggaagtctctgcgtttagtcatgcgttcattt
tctgctatctccaatggattagaaagttctgcatcagatgagaaggaagtgtgtcatatt
cacaatggagatgttcttggtggtagagtgtggaagattcttcctggtgtcggtggcatt
cttgtgcagataggaccccatatatatggtaaagttcactacactgaacttgctgatccc
ccggtatctgatcccttgtctggctataatgaaggtcaatttgttaaatgtaaagtctta
gaaatcaactacttagctaacagttctgtccatattgatttatcatttcgcatctttgag
gatactataaatggagactctcgtagcaattgtattcagaagattggagaccttcagcct
gatatggtggtgaatggttatgttaagagtgttactccaaagggctgcttcattttgctt
tccaggaatatagatgcaatgatcaaggtttctaacttgtctgatggatatgttgaggat
cctgtaaaagaatttcctgttggtaaacttgtaaaggggaaaattctatctgtggaacct
ttatcaaagcgtgttgaagttactctgaaggcggataataagaatagcagatccgagttg
agtaattttggtagtctgaatgttggtgatgttgtaaggggcaggatcaaacgggttgag
tcatttggtctctttattgttattgataatgtaaacttggttggattatgtcacgtgtca
gagatttctgatgatcatgttgatgatcttgacgaccaatttaaagcaggagagagggta
actgcaaaagttttaaaagtggatgtggaaagacaccgcatatcacttggaatgaagtct
tcatattttgaagatgaagaccatggaaataatgaaatggatgttgattcagttgataac
tctataactctggtaaatgccaaggttgacatgcctcaagttgaatattctgattctaca
tttgaacttgaagatgaatcagctcttatccaagtggaatcaagggcatctgtgcctcct
ctagaggttactcttgatgacatggaggatgatgagatgtttgaccaactagacaacaag
gaaacaattgctaatggttccaatgctattgatgaaaagagcaacaggcaggctaagaaa
aaagcaaaggaagagaaggaacaacaaatcagggctgctgaacaacgtttgcttgaggtt
gatattcctagaactagcgatgagtttgagaaagcagttagaagctctccaaacagcagc
ttcgtctggataaaatacatgcaatttatgctttctatggctgatgttgagggagcccgt
tctgtggctgaaagggccttgaaaacaatcaaaatcacttgtgaaacagagaagctgaac
gtttgggtcgcataccttaatctggaaaatcagtatgggaatcctccgaggaggcagtag
DBGET
integrated database retrieval system
