Chenopodium quinoa (quinoa): 110719114
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Entry
110719114 CDS
T05764
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110719114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110719114
Membrane trafficking [BR:
cqi04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
110719114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML_2
zf_RING_Vps8
zf-RING_2
WD40_Prp19
EIF3I
Beta-prop_WDR90_POC16_2nd
zf_RING_Vps8_fungal
PEP5_VPS11_N
zf-RING_11
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
110719114
NCBI-ProteinID:
XP_021753708
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MAPFPSENGVDGDDEREEEEEEEEEELSEDEEATGSEEEEPKLKYQRMGGSLSSLLSTDA
ATCIAVSERMIALGTHCGAVHLLDFLGNQVKEFHAHKAAVNDLNFDIDGEYIGSCSDDGS
IVISSLFTDEKRKFEYHRPMKAIALDPDYARKSLKRFVAGGLAGQLIFYAKKWFGYQEQV
LHSGEGPIHAVAWRTSFIAWANDAGVKVYDTANDQRVTFIERPRGSPHPELLLPHLVWQD
DALLIIGWGTSVKIASLRGNQNVGANGSYKPVYVSSSNQVDIVASFQTNYYISGIAPFGE
FLAILAYIPGEEDGEKDFSSTAPSRQANAQRPEVRIVTWTNDELATDALPVHGFEHYKAK
DYCLSHTPLSGSNYTNGRWAAGDEPLYYVVSPKDIVIAKPRDAEDHINWLLEHGWYDKAL
TEVEATHGRKELFEEVGSRYLEHLLAEKRYGEAAALCPKLLQGSASAWERWIIRFAQLRQ
LPALARYMPTENPKLSDTLYELALVALAMNPAYHKDFLSAVKSWPRSIYSALTVLSEIEP
QLRASLMTDDLKEALAELYVRTGKNEKAFSFFADLLKPEVFDFIERHNLHAAVREKVVQL
MMLDTKRATSLLIQQRDLITPPDVVSQLLKAGDKCDSRYFLYLYLHALFEASPHAGRDFH
DMQVELYADYDTTMLLTFLRSSRHYTLEKAYDLCVRKGLLKEKAFILGRMGNSKQALAVI
INELGDMEEALEFASMQNDDDIWEELIKQSTQRPEMVGMLLEHTVGNLDPLHIVNVVPDG
LEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKEARHAVYMNNTEDEAR
TKRDEKRMEESFAKPPSFKNMDLKSKTRVGGRCCICFDPFSIQNVSVVIFFCCHAYHMTC
YMDSVNTYSDENEAQDGSLDSEYDEFDDEENGESQSDSSRMRCILCTNAAR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggccccttttccttcggaaaatggcgtcgatggcgacgatgaaagagaggaagaagaa
gaagaagaagaagaagaattatcagaagatgaagaagcaacaggttctgaagaagaagaa
ccgaagctcaagtatcagagaatggggggcagtttatcttctttgttatcgaccgatgcc
gctacttgtatcgctgtttctgaacgtatgatcgcgcttggtactcattgtggtgccgtc
catttgcttgattttctcggaaatcaggtaaaggaatttcatgcacacaaggctgctgta
aatgaccttaattttgatatagatggcgaatatattggcagttgttctgatgatggatca
attgttataagcagtctctttactgacgaaaaacgcaaattcgagtatcatagaccaatg
aaggcaatagctctcgatcctgattatgcaagaaaatcattaaaaagatttgtcgctgga
ggattagctggtcaattaatattctacgctaagaagtggtttggttatcaggagcaggta
ttgcactctggtgagggtccaatacacgcagtggcatggaggacgagtttcattgcttgg
gctaatgatgcaggcgtgaaggtttatgacactgccaatgatcagcgcgtgacttttatt
gagagaccgcgaggaagtccacatcctgagctcttgctcccgcacctagtttggcaggat
gatgcacttctgattattggttggggcacatcagtgaagattgcttctttaaggggaaat
cagaatgtaggagccaatgggtcctacaagcctgtttatgtatcaagctcaaaccaggtg
gatattgttgcatctttccagacaaactattatatatccggcattgctccatttggtgaa
tttttggctattctagcctatatccctggagaggaagatggagagaaggactttagtagt
acagctccatcacgtcaggctaatgcgcagaggccagaagtacgcattgttacatggact
aatgatgagctggcaactgacgctttaccagttcatggttttgaacactataaagcaaaa
gactactgtctctcacacactcctctatcagggagcaactatactaatggtcgatgggct
gcaggtgatgagccactatactatgttgtatccccaaaagacatagtaattgcaaaacca
agggatgctgaagatcatatcaattggcttcttgaacatggatggtatgacaaagctctc
accgaagttgaggcaacacatggacgaaaagaacttttcgaagaggtgggatcaaggtat
cttgagcatttacttgctgagaaaagatatggtgaagctgcagctttatgtcccaaattg
ctgcaagggtctgcttcagcatgggaaagatggattattcgctttgctcagcttcgtcag
ctaccagctttagcccgttacatgccaactgagaacccaaagctcagtgatactttatat
gagcttgccctagtggctcttgcaatgaatcctgcgtaccacaaggatttcttatcagct
gtgaagtcatggccacgatcaatttactctgccctgactgttttgtcagagatagagcct
cagcttagagcttctttaatgactgacgatctgaaagaggcattggcagagctatacgtg
agaactgggaaaaatgagaaagcattttcattctttgctgatcttttgaaaccagaagtt
ttcgacttcattgagaggcataacttgcatgctgctgttcgtgaaaaggttgtccaactg
atgatgcttgacaccaaacgtgcaacatccttgctgatccagcaaagggatctgattacc
ccacctgatgtagtgtcgcagcttttaaaggctggagataagtgtgattccagatacttt
ttgtatctgtacttgcatgctttatttgaggccagtcctcatgctggaagggattttcat
gatatgcaggtggagctatatgcagattatgatacaacaatgctacttactttccttcgt
agcagtcgacattatacactggagaaggcctatgatctttgtgtgagaaaaggtctcctg
aaagagaaagcattcattcttggaagaatgggaaattcaaaacaagcccttgctgttatc
atcaatgaattaggtgatatggaagaggctttagagtttgctagcatgcagaatgatgat
gacatttgggaagaattgatcaagcaatctacccagaggcctgaaatggttggaatgttg
ctggaacatacagttggcaaccttgatcctcttcatattgtaaatgttgtgcctgatgga
ctggaaatacctaggctcagggatcgattggtcaaaatcataactgactatagaactgaa
acctcactcagacatggttgtaatgatattttaaaggctgatattgtcaatcttttggtt
aagtactacaaagaagcaaggcatgcggtttatatgaataacacagaggatgaggctaga
actaagagagatgaaaagaggatggaagagtcctttgcaaaaccaccaagtttcaaaaac
atggatttgaagtctaagactagggtgggaggcagatgttgcatatgctttgatcccttt
tccatccaaaatgtctcggttgtcattttcttttgctgtcatgcatatcacatgacttgt
tatatggactcagtcaatacatatagtgatgagaatgaagctcaggatggttcccttgat
tctgagtatgatgaatttgatgacgaagagaatggtgaaagtcagtcagactcctctcga
atgcggtgtatattatgtactaatgcagctagatga
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integrated database retrieval system
