Chenopodium quinoa (quinoa): 110719844
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Entry
110719844 CDS
T05764
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03082
ATP-dependent chromatin remodeling
cqi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110719844
03083 Polycomb repressive complex
110719844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110719844
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110719844
Histone modification proteins
HAT complexes
HATB complex
110719844
HDAC complexes
Sin3A-HDAC complex
110719844
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110719844
PRC2.2
110719844
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110719844
Heterochromatin formation proteins
Other heterochromatin formation proteins
110719844
Chromatin remodeling factors
NuRD complex
110719844
NuRF complex
110719844
NuRF complex (fruit fly)
110719844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
EIF3I
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
110719844
NCBI-ProteinID:
XP_021754520
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MTEKGKGGRSGKGGELTVDEKYTQWKSLVPILYDWLANHNLVWPSLSCRWGPLLEQATYK
NRQRLYLSEQTDGSVPNTLVIANVEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGE
VNRIRELPQNSNIVATHTDSPDVLIWDVENQPSRHAILGAPSSRPDLILTGHQENAEFAL
AMCSYEPLVLSGGKDKLVVLWNINDHISTLATEPGAAKSASTGSNIKSASRTGDGNNGTA
ASPSVEARGIYKGHDDTVEDVQFCPTSAQQFCSVGDDSCLILWDSRTGLTPATKVEKAHN
ADLHCVDWNPHDENFILTGSADSSIHMFDRRNLTAGGVGAPVHKFQGHNDPVLCVQWSPH
NRSVFGSAAEDGLLNIWDYERTGKLQTESGNKASEYPAGLFFRHAGHRDKVVDFHWNSID
PWTIVSVSDDCSSSAGGGTLQMWRIIDLLYRPEDEVLAELDKFRSHVTTCSS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaaaggtaaaggaggaaggagtggaaagggtggagagctaacagtggacgag
aagtacacccagtggaaatctttggtacccattctctacgattggctcgctaaccacaat
cttgtttggccttctctttcttgccgatggggtccacttcttgagcaagccacctacaag
aatcggcagcgtctttatctctctgaacagactgatgggagtgttccaaatacacttgtt
attgcaaacgttgaagttgttaagcctagggttgctgctgcagagcatatatctcagttt
aatgaagaggctcgctctccatttgtaaagaagttcaaaaccatcatacatccaggggag
gtgaacaggatcagagaacttccgcagaatagtaacatagtggctacacacactgatagc
cctgacgtattaatttgggatgtggaaaatcaacctagtcgtcatgctattctgggagct
cctagctctcgtcccgatctgatattgactggacaccaggaaaatgctgaatttgctctt
gcaatgtgctcttatgaaccattggtgctttctggagggaaggataaattagtggttttg
tggaatataaatgatcatatatcaacgctggcaacagaaccaggggccgcaaaatctgct
tccactggcagcaatatcaaatcagcatctaggactggcgatggaaataatggaactgca
gctagtccttccgtggaagcacggggcatttataagggacatgatgatactgtggaggat
gtgcaattttgtcccacaagtgctcagcagttttgcagtgtgggtgatgattcttgcttg
atactatgggattcaagaactggattgactccagctactaaggttgaaaaggcccataat
gctgatctacattgtgttgactggaaccctcatgatgaaaatttcatattgactggatca
gctgatagttcaatccacatgtttgatcggagaaatctcactgcggggggagttggagca
cctgtccataaatttcaaggccacaacgatcctgtcctttgtgtacagtggtcaccacat
aatagatcagtttttggcagtgctgctgaggatggcctgttgaacatatgggattatgaa
aggactggtaaactgcaaacagagagtggaaacaaagcgtcggagtatccagcaggtttg
tttttcaggcatgcaggacacagggacaaagtggttgacttccactggaattcgattgat
ccatggactattgtcagtgtttcggacgattgctcaagctctgctggaggtggaacattg
cagatgtggcgcattattgatttgctttaccgaccagaagatgaagtcctggcggagttg
gacaagttccgatcccatgtaaccacatgctcctcctag
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