Chenopodium quinoa (quinoa): 110719916
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Entry
110719916 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28-like
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110719916
03009 Ribosome biogenesis [BR:
cqi03009
]
110719916
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110719916
Spliceosome [BR:
cqi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110719916
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
Pre-60S particles
Helicases
110719916
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ARTD15_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
110719916
NCBI-ProteinID:
XP_021754591
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MGYDIHSGDDNASESAWDFAAYSEAVAEEHARRHTTSVDQKIHKLRQQRAVSLPNPNDSD
SDSESNKQEDYKAEKGDDDENDVVESDKPFFAAAEGVSYQAKSFLELNLSRPLLRACEAL
GYSKPTPIQAACIPLAMAGRDICASAITGSGKTAAFSLPTLERLLYRPKRVPAIRVLILT
PTRELAVQVHSMIEKLAQFTDIRCCLIVGGLSNKVQEAALRSMPDVVVATPGRMIDHLRN
SMSVDLDDLAVLILDEADRLLELGFNAEIQELVRMCSKRRQTMLFSATMTEEVAELVKLS
LKKPLRLSADPSAQRPAALTEEVVRIRRIREAHYEAVLLALCSKTFTSKVIIFSGTKLAA
HRLKILFGLAGLKAAEFHSHLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIAGIRTVI
NYACPRDLTTYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKKAGSRLKSRIVAEDSI
NKWAQTIEQMEDQVATILQEEKEEMALRKAEMEAAKAENMIEHREEIFFRSKKTWFMIAI
GFCWGAIICSELRFKILIFAKEEEDRGEPTRQTSSSDESSAEEMAGQRRRRAIINPGQFQ
AVEPAAKRPRLGEDPTEDVKEKTPPPPEILDGRPKYFKKAEERVEEAKNFDVPSTSVGNS
FKTFQSSEMGFESAPLSVVPDAARNALLSHRASAIEYFGDLSGLSELEKVKVLSLRAAAG
VSKPLVRVPDPFVENRKMLLHVVHNHFFAMGMNMELKGKAEKAEESECRAEEPKAEAEAQ
AEREAEEAKKKEPHPASSSAGAGSSKGPTAQPDSADAEA
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgggttacgacattcattccggcgacgataatgcctccgaatctgcctgggacttcgcc
gcctactccgaagccgtcgctgaagaacacgcccgccgtcacaccacctcagtcgaccaa
aaaatccacaagcttcgtcaacagcgcgccgtctctctccctaaccctaacgactccgac
tccgactccgaatccaataaacaagaggattacaaggctgagaaaggagatgatgatgaa
aacgatgttgttgaaagtgataaacctttctttgcagctgctgaaggtgtttcctatcaa
gctaaatcgtttttggagcttaatctttcgaggccgttgcttcgagcttgcgaagcgtta
gggtactctaagcctacaccaatccaggctgcttgtataccattggcaatggccgggcgt
gatatttgtgcgagtgcaataaccggttctgggaagaccgcagctttttcattgccaacc
ttggagaggttgttataccgcccaaagcgtgtgccggcaattagggttcttattcttact
cctacaagggagctagctgtccaggttcacagtatgatagaaaaacttgctcaatttaca
gatataagatgctgcctgattgttggtgggctatcaaataaggtgcaagaggctgcatta
aggtcgatgccagatgtcgttgtggcaactccagggcgtatgattgaccatttacgtaat
tcaatgtctgtggatctagatgatcttgctgtcttgattcttgatgaggctgatcgactt
ttggagcttggatttaatgctgagatccaggaactcgtccgtatgtgttcaaaacggagg
cagacaatgctgttttctgccacaatgactgaagaggttgcagagcttgtcaaactatcc
ttaaagaaaccactacggttgtcagctgatccgtctgcccaacgaccagcagctttgact
gaggaggttgtgagaataagaagaattcgtgaagcacattatgaggcagtgcttcttgca
ttatgctcaaaaacattcacatccaaagtaatcatttttagtggaaccaagcttgctgct
cataggttgaagatcttatttggattagcaggcttaaaagcagccgagtttcatagccat
cttacacaagcgcagcgtcttgattctcttgagcttttcagaaaacaggaagtagacttc
ttgattgcaacagatgttgctgctcgagggcttgacatagctgggattcggacagttatt
aattatgcttgtcctcgtgatctcacaacatatgtacaccgagtgggtcgtacagcaaga
gctggtcgggaaggatacgcagtcacatttgtcactgataatgatcgctctctactaaaa
gccattgctaaaaaggctggttctaggttaaagagcagaattgttgctgaagattcaatt
aataagtgggcgcaaacaattgagcagatggaagatcaggttgctactattcttcaagaa
gagaaagaagaaatggctttgagaaaagcagagatggaagcagcaaaggctgaaaatatg
attgagcacagggaagaaatatttttccggtctaaaaagacgtggtttatgattgccata
ggattttgttggggagccattatttgtagtgaactgagattcaagatcttgatttttgcc
aaagaagaagaagacagaggagagccaacaaggcaaacatcttcttcggacgagtcttcc
gccgaagaaatggcaggtcaaaggagaagaagagctattataaaccctgggcagtttcaa
gctgtcgaacctgctgctaagagacctcggctaggtgaagacccgaccgaggatgttaaa
gagaagactcctcctcctcccgagatattggatgggaggcccaaatattttaagaaggcc
gaggaaagagttgaagaagcgaagaactttgacgttccttcaacttcagttggaaactcc
tttaagaccttccagtcttctgagatggggtttgagtctgccccactatcggttgttcca
gatgctgctaggaacgctcttctttctcaccgagcctcagcaattgagtacttcggtgac
ttgtctggcttgtccgaattggagaaggtgaaggtcttgtcccttcgggctgcagctggg
gtgtctaagccccttgtgagggttccagacccatttgttgagaatcggaaaatgttgttg
cacgtcgttcataaccattttttcgctatgggaatgaacatggagttgaagggcaaggca
gaaaaggccgaagaatctgagtgccgagctgaagagccaaaagccgaggctgaggctcag
gctgagagggaagctgaagaagccaaaaagaaagaacctcatcctgcttcctcttcggct
ggtgctggaagttccaagggcccaactgctcaacctgattctgctgatgctgaagcatag
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