Chenopodium quinoa (quinoa): 110719962
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Entry
110719962 CDS
T05764
Name
(RefSeq) THO complex subunit 4D-like
KO
K12881
THO complex subunit 4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03015
mRNA surveillance pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110719962
09122 Translation
03013 Nucleocytoplasmic transport
110719962
03015 mRNA surveillance pathway
110719962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110719962
03041 Spliceosome [BR:
cqi03041
]
110719962
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110719962
TREX complex
110719962
Spliceosome [BR:
cqi03041
]
Complex C
Other components
EJC/TREX
110719962
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110719962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
110719962
NCBI-ProteinID:
XP_021754657
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MDKALDMSLDDIIKSKKSAGRGKGRGGAPRGRAARGAVSGGRMRGIGRGAGRQGPLGVNT
RPSSFAIAKSFRRTKNFPWQQDLFEDSLAAAGLPAMENGTNLHITNLDRAVSNDDIRELF
SEIGELKRYAIHFDKNGQPSGSAEVVYAKRSDAFAAHKRYNNVQLDGRPMLIEVASPNTG
GPVSARVNIVGGTNGKASRRVVMTQRGGRTASLAQTNRGVGQQRTRGGFRNGPARAQTQT
QGAGRGQSRGRGRGRGKKQLDKSAEDLDKELETYHAEGMQIS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggataaggctttggatatgtctttggatgatatcataaagagcaagaaaagtgctggc
agaggtaaaggacgaggtggtgcccctcgggggcgtgcagctagaggagctgttagtggt
ggaagaatgagagggataggtagaggggcaggccgtcagggccctcttggagtaaatact
cgaccttcgtctttcgctatagccaagtcttttcgcagaaccaagaacttcccatggcag
caagatttgtttgaagacagccttgcagctgcaggactacccgctatggaaaatggtaca
aacttacatattacaaatctggaccgtgcagttagcaatgatgatataagggagcttttt
tctgagatcggggagctgaaacgttatgctatccactttgacaaaaatggtcaacccagt
ggatcagctgaagtcgtctatgcaaaaaggagtgatgcttttgccgcccacaagagatac
aacaatgttcagcttgacggaagacctatgctgattgaagttgcaagccctaacacaggt
gggcctgtgtctgctcgtgtaaacatcgtaggaggcaccaatggaaaggcatcaagaaga
gttgtcatgacgcaaagaggtggccgtacagcttcattggctcagacaaatcgtggtgtt
gggcaacaaagaacaagaggtggatttagaaatggcccagcacgtgcacaaacgcaaacc
caaggtgcaggccgtggccaatctcggggaagaggacggggtcgtggaaagaagcagcta
gacaaatctgccgaggatcttgacaaggagctggagacctatcatgctgaagggatgcag
atctcgtag
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