Chenopodium quinoa (quinoa): 110720571
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Entry
110720571 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28-like isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110720571
03009 Ribosome biogenesis [BR:
cqi03009
]
110720571
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110720571
Spliceosome [BR:
cqi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110720571
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
Pre-60S particles
Helicases
110720571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ARTD15_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
110720571
NCBI-ProteinID:
XP_021755300
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MGSGFVFEPPSDEELEDDIHSGDDNAPESAWDFAAYSEAVAEEHARRHTTSVDQKIHKLR
QQRVVSLPNDSDSDSDSESNKQEDYKPDEGDDDENDVVESDKPFFAAAEGVSYQAKSFLE
LNLSRPLLRACEALGYSKPTPIQAACIPLAMAGRDICASAITGSGKTAAFSLPTLERLLY
RPKRVPAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLIVGGLSNKVQEAALRSMPDA
VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFNAEIQELVHMCSKRRQTMLFS
ATMTEEVAELVKLSLKKPLRLSADPSAQRPAALTEEVVRIRRMREAHYEAVLLALCSKTF
TSKVIIFSGTKLAAHRLKILFGLAGLKAAEIHSHLTQAQRLDSLELFRKQEVDFLIATDV
AARGLDIAGIRTVINYACPRDLTTYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKKA
GSRLKSRIVAEESINKWAQTIEQMEDQVATILREEKEEMALRKAEMEAAKAENMIEHREE
IFSRPKKTWFITEKEKNLIAKEVKGYSETKKNSGNVVVSAQQAEDLKLKEKRKREREKNL
PRKKRRKLEAEREMLEEENESDDSEGENKKSKKDKSGIPLVEVAYRKAKAIKAGKKAQDG
GKNIKKMGKKAAQPQSRTDEMQELFLTDMSEKRGKKNLQHVQKKSRNSFKSKSRYKRR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaggcttcgtattcgagcctcctagcgacgaagaactcgaagacgacattcat
tccggcgacgacaatgcccccgaatctgcctgggacttcgccgcctactccgaagccgtc
gccgaagaacacgcccgccgtcacaccacctccgtcgaccagaaaatccacaagcttcgt
caacagcgcgtcgtctctctccctaacgactccgactccgactccgactccgaatccaat
aaacaagaggattacaagcctgacgaaggagatgatgatgaaaacgatgttgttgaaagt
gataagcctttctttgcagctgctgaaggtgtttcgtatcaagctaaatcgtttttggag
cttaatctttcaaggccattgcttcgagcttgcgaagcgttagggtactctaagcctaca
ccaatccaggctgcttgtataccattggcgatggccggacgtgatatttgcgcgagtgca
ataaccggttctgggaagaccgcagctttttcactgccgaccttggagaggttgctatac
cgcccaaagcgtgtgccggcaattagggttcttattctcactccaacaagggagctagct
gtgcaggttcacagtatgatagaaaaacttgctcaatttacagatataagatgctgcctg
attgttggtgggctatcaaataaggtgcaagaggctgcattaaggtcgatgccagatgcc
gttgtggcaactccagggcgtatgattgaccatttacgtaattcaatgtctgtggatcta
gatgatcttgctgtcttgattcttgatgaggctgatcgacttttggagcttggatttaat
gctgagatccaagaactcgtccatatgtgttcaaaacggaggcagacaatgctgttttct
gctacaatgactgaagaggtggcagagcttgtcaaactatctttaaagaaaccactacgt
ctgtcagctgatccatctgcccaacgaccagcagctttgactgaggaggttgtgagaata
agaagaatgcgtgaagcacattatgaggcagtgcttcttgcattatgctcaaaaacattc
acatccaaagtaatcatttttagtggaaccaagcttgctgctcataggttgaagatctta
tttgggttagcaggcttaaaagcagccgagattcatagccatcttacacaagcacagcgt
cttgattctcttgaacttttcagaaaacaggaagtagacttcttgattgcaacagatgtt
gctgctcgagggcttgacatagctgggattcggacagttattaattatgcttgtcctcgt
gatctcacaacatatgtgcaccgagtgggtcgtacagcaagagctggtcgggaaggatac
gcagtcacatttgtcactgataatgatcgctctctactaaaagccattgctaaaaaggct
ggttctaggttaaagagcagaattgttgctgaagagtccattaataagtgggcacaaaca
attgagcagatggaagatcaggttgctactattcttcgagaagagaaagaagaaatggct
ttgagaaaagcagagatggaagcagcaaaggctgaaaatatgattgagcacagggaagaa
atattttcccggcccaaaaagacgtggtttataacagagaaggaaaagaatttaattgca
aaggaggtgaagggatactcggagacgaagaaaaattctggtaatgtcgttgtcagtgcc
cagcaagcagaagatttgaaattgaaggaaaagaggaaacgagagcgtgagaaaaacttg
ccccggaaaaagcgcagaaagctggaagcggagagagagatgctggaagaggaaaatgag
tctgatgattcagaaggggaaaataaaaagagtaagaaagataaaagtggaataccgctt
gtcgaggttgcctatcgcaaagcaaaagcaatcaaggctgggaaaaaagcacaagatggt
ggtaaaaatatcaaaaagatggggaagaaagcagcacaacctcagtcaagaacagatgag
atgcaggagctattcctgactgatatgagtgagaaacggggaaaaaagaaccttcagcat
gttcaaaagaagtcaaggaattcatttaagagtaaatcaaggtataagcgaaggtag
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