Chenopodium quinoa (quinoa): 110720580
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Entry
110720580 CDS
T05764
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110720580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110720580
Membrane trafficking [BR:
cqi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
110720580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
110720580
NCBI-ProteinID:
XP_021755313
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MIVEGIEDEEKWLAEGIAAVQQNAFFMLRAVDSDNLREALKYSAQMLSELRTSKLSPHKY
FELYMRAFDELRKLEMFFKDESRHGLSVSDLYELVQHAGNVLPRLYLLCTVGSVYLKSNE
ASCKDLLKDLVEMCRSVQHPIRGLFLRSYLCQVTRDKLPDIGSENEGVGDSVMDAVDFVL
QNFTEMNKLWVRLQHQGSARVKEKREKERNELRDLVGKNLHILSQIEGVDLELYRDTVLP
RILEQVVNSKDELAQHYLMDCIIQVFPDEYHLQTLDVLLAACPQLQPTVDIKTVLSQLME
RLSNYAASSIEVLPEFLQVEAFAKLNNAIGKIIEAQIDMPIVGAITLYTSLLMFTLRVHP
DRLDYVDLVLGACVRKLSGKPKLEDSRATKQIIALLSAPLDKYNDAVTALTLSNYPRIMD
YLDNDTNKIMAMVIIQNILKNYTCISTADQVEALFELIKGLIKDIDGISVDELDEEDFSE
EQNSVARLIHMLYNDDPDEMLKIICTVQRHIMTGGQRRLPFTVSPLVFSALKLVRRLQGQ
DGEADGEEAPASPKKIFRLMNQTIEALSSVPSPDLALRLYLQCAEAASDCDLEPIAYEFF
TQAFILYEEDIADSKAQFTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKADQC
RAVYACSHLFWVDDQDGINDGERVLLCLKRSLRIANAAQQMANVTRGSSGPVTLFVEILN
KYLYFFEKGNPKVTSSAIQGLVELIRTEMQSDTSTPDIAATAFFNSTLRYIQFQKQKGGV
MGEKYEPVKL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcgaaggaatcgaagacgaagaaaaatggcttgcagaaggaatcgccgctgtt
caacagaacgccttcttcatgcttcgtgctgtggattcagataatctcagagaagctctc
aagtactccgctcaaatgctttcggagctccgaacctctaaactttctcctcacaagtat
ttcgaactctatatgcgtgctttcgacgaattgaggaagctggaaatgttcttcaaagat
gagagcaggcatggtctttcagtttctgatctctatgaacttgttcagcatgctggcaat
gtgttaccgaggctgtacctgctttgtactgtgggttctgtttacctcaaatcgaacgag
gcttcctgtaaagatcttctgaaagaccttgttgagatgtgtcgttctgttcaacatcct
attcgtggtcttttcttgaggagctacctttgtcaagtcacaagagacaagcttcctgat
attggttctgagaatgaaggagttggagattcagtgatggatgctgtggattttgtgctg
caaaacttcacagagatgaataaactttgggttcgtttgcagcatcaggggtctgctcgg
gtaaaagagaaacgagaaaaggagaggaatgagcttcgtgatcttgttgggaagaatttg
catatactaagtcaaatagagggtgttgatcttgaattgtacagagatactgttctgccc
agaatcctagagcaggttgtaaattctaaagatgagcttgcacaacattacttgatggac
tgtataatccaagtttttccggatgagtatcacttgcaaacgcttgacgtattattagct
gcttgtcctcaactccagccaacagttgacatcaaaactgtgctatctcagctaatggag
agactttcaaactatgccgcatcaagtatagaagtattacctgaattcctgcaagtggaa
gcttttgctaaattaaacaatgccattggaaagattatcgaggcgcagattgacatgcca
attgttggggccatcactctatacacctctcttcttatgttcactctccgtgttcaccct
gatcgcctggattacgtggatctagttctgggtgcatgtgtcaggaaactttcagggaag
ccaaagcttgaagacagccgagcaacgaagcagattattgcactattaagtgctccactg
gacaagtataatgatgcagttacagcacttacactttctaattatccccgcatcatggac
taccttgataatgacaccaacaaaattatggcaatggttatcatacaaaacatcttaaag
aactacacttgcatttccactgctgaccaggtagaggcactatttgagttgatcaaggga
cttatcaaagatatagatggaatctcagtggatgagttagatgaagaggatttcagcgaa
gaacagaattctgttgcgcgtcttatccacatgctatataatgatgaccctgatgagatg
ttaaagattatatgcactgtgcagagacatatcatgacaggaggacaaaggcggttaccc
ttcactgtttcacctcttgttttttctgcactcaagttggtcaggcggttacaaggtcaa
gacggtgaggcagatggggaagaggcacctgcttcgcctaaaaaaatattccggttaatg
aatcagactatagaggctctttcatctgttccatcccctgatcttgcattgaggctgtat
ttgcaatgtgctgaggctgccagtgattgtgaccttgagccaatagcatatgaatttttt
acccaagcattcattctctatgaagaagacattgcggactccaaagcacaatttacagct
atccatcttataattggtactctacaaaggatgaatgtgtttggtgtggagaacagagat
actctgacacataaggcaacagggtactctgcaaaacttttgaagaaggccgaccaatgc
agagccgtttatgcatgctctcatctcttttgggtggatgatcaagatggtatcaacgat
ggagaaagggtcttgctatgcctcaagcgttctttgcggattgcaaatgctgctcaacag
atggcaaatgtgacacgtggaagtagtggaccagttaccttgtttgttgaaattctgaac
aagtatctctacttcttcgagaagggaaatccaaaagttacaagttcagcaatccaaggc
cttgtagagttgataagaactgaaatgcaaagtgacacatcaactcccgatatagctgcc
actgccttttttaacagcactttgcggtatatccaattccagaaacagaaaggaggtgta
atgggtgaaaagtacgaaccagttaaactatga
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