Chenopodium quinoa (quinoa): 110720806
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Entry
110720806 CDS
T05764
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110720806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110720806
03036 Chromosome and associated proteins [BR:
cqi03036
]
110720806
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110720806
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110720806
PBAF complex
110720806
GBAF(ncBAF) complex
110720806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
110720806
NCBI-ProteinID:
XP_021755535
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MPTSPSDARHKRRKARGPKTMKRHRSGDEEEEDEEEENEVAAEVDEDEDLHPNPKNAQNP
RIRAISGPEVISGSGIRISDFPAAMKYDVNRPHSLVLEIAAAEREREIKGQGQGQGGGAI
LENISYGQLQALSAVPADNPALLGLGLGSGSGDQESSVVITPPPIREGRGVVKMFWDRLH
VLPFHAEWFQPTTVHRLERQVVPHFFSGKSAEHNADKYLDCRNLIVAKYMENLEKRLSIG
DCQELVVGVDHEDLSRIFRFLDHWGIINYCAPSPPQESWSFESYLREDSNGEVHVPSVML
KSIDSLIKFDLPKCRLKSCDLPSSLPSTSPDIADLDSRVREMLSESNCNFCSQPLLTAYY
QSIKEGDTMLCSDCYHEGRLIIGHSSMDFIKIDPSKEYGDQDGDTWTDQETLLLLEALEI
FNDSWNEIAEHVGTKSKAQCILHFLRLPVEDGLLEKVEVPCSSGQTNGSVMDNHDRPCLN
ENGVSSGPQEHDSSENRFPFVNSANPVMALVAFLASAVGPRVAAACAHASLAALAEDDGS
LHGNRMDSDEGPVQREFSQLKDKLNSEASSLSAEKVKCAAKAGLAAATMKAKLFADHEER
EIQRLSANIINHQLKRLELKLKQFAEVETLLMKECEQVEKTRQRLAGERARACTTRFGTS
GVPSPINLSGQVNNNINSKPPVASPSQPGVSGYANSQMNHPQMSFVPRQQMFSFGPRLPL
SAIQPSSSGMPSSVMFGAQGSGQSLSHQMLRPVTGTSTGMG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttctccatcagacgctcggcacaaaaggcgtaaagcaagggggccaaagacc
atgaaacggcaccgtagtggtgatgaggaagaagaagatgaagaagaagagaacgaggtt
gcggcagaggtagatgaagacgaggacctccaccctaaccctaagaatgcccaaaatccc
agaattagggcaatatccggacctgaagtgatctctggaagtggcatccgaatctcggac
ttccctgctgccatgaagtatgatgtgaacaggccccattcgcttgtgctagaaattgct
gctgctgagagagaaagagaaatcaaggggcaggggcaggggcagggtggaggtgccatt
ttggagaatatatcgtacgggcagcttcaggcattgtctgctgtgccagcagataaccct
gctctgttgggtttgggtttgggttcaggttcaggggaccaagagagttcagttgttatt
accccacctcccattagggaaggtaggggtgtggttaagatgttttgggacaggcttcat
gttctcccctttcacgcagagtggtttcaaccaacaacagtgcacaggttggaacggcaa
gtggtgcctcattttttttctggcaagtctgctgaacacaatgctgataaatatctggat
tgtcgtaatctaattgttgccaaatacatggaaaacttggagaagaggttatcaattggg
gattgccaagaattggttgttggtgttgatcacgaagatctcagtcgaatcttccgtttc
cttgatcattgggggatcattaactattgtgctccttcgcctcctcaggagtcttggagt
tttgagtcgtatttgagagaggattcaaatggcgaagttcatgtgccttcagttatgttg
aagtccattgatagtttaatcaagtttgaccttccaaaatgtaggttgaagtcttgtgat
ttgccctcgtcattaccctcaacttcccctgatattgctgacttggacagtagagtacgg
gagatgttatcagaaagtaactgtaatttttgctctcagcccctgttaacggcatattat
cagtcaattaaggagggtgatacaatgctgtgttctgattgctaccatgaagggaggctt
attattggtcattcaagcatggatttcattaagatagatccttcaaaagaatatggtgat
caagatggagatacttggactgatcaggaaacacttctacttctcgaggcacttgaaatt
tttaatgatagctggaatgaaatagctgagcatgttggaactaagtcaaaggcacaatgc
attcttcactttcttcgtttgcccgtagaggatggcttactagaaaaagttgaagttcca
tgttcctctggtcaaactaatgggtcggttatggacaatcatgatagaccatgtctgaat
gaaaatggcgtttcttcaggaccgcaggagcatgattcttctgaaaataggtttccattc
gtaaattctgcaaatcctgtcatggccctggttgcttttttggcttctgctgtaggtcct
agagttgctgctgcttgtgctcatgcttctttggcagcccttgcagaggatgatggatca
ttgcatggtaataggatggattcagatgaaggtcctgtgcagagagaattcagtcagctg
aaagacaaattaaattcagaagcatcttcattatctgccgagaaagtcaaatgtgctgca
aaagctggtcttgctgctgcaacaatgaaagcaaaattgtttgcagaccatgaagagcgg
gagatacagaggctgtctgctaatattataaatcatcagttgaagagattggaattgaag
ctgaagcaatttgccgaagtggagaccttattaatgaaggaatgtgaacaagttgagaaa
acgaggcaaaggctggctggtgaaagggctcgtgcttgtactactagatttggaaccagt
ggagttccttcaccaataaatttgtctggtcaagttaataataatatcaacagtaaacca
ccagtagcatcaccgtcacagcctggggtttctggctatgccaatagccaaatgaaccat
ccacagatgtcttttgtaccacgtcagcaaatgttctcttttgggccccgcttgccgctt
tcagccatacaaccttcttcctcagggatgccgtcaagtgtcatgtttggtgctcaaggg
agtggccagtctttgagtcatcaaatgttgcgacctgtaacagggactagcacaggcatg
ggttaa
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