Chenopodium quinoa (quinoa): 110721018
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Entry
110721018 CDS
T05764
Name
(RefSeq) AP-5 complex subunit zeta-1-like isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
110721018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110721018
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
110721018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
DUF7708
Motif
Other DBs
NCBI-GeneID:
110721018
NCBI-ProteinID:
XP_021755833
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MADRDRNWDFYLRTLSASARDSTSPASDPSLLESVKKLCELCKAEKSDDLVARIYSSIIK
LFQRSVASLSQSRSSHGLLLLAILQFFLDFGESVLHDADPSLRTFFRSCLSRDFADPVIA
EATIEFLLVNKKKLQTSFPTVLPQFFPLLLKLIAWNGEKIEKSFLKIFPALVAPGSFLAL
FPAIADLPVLVVALEKVEKSSGTLVGNSIASIKNSTAPEMLLALMDEAYTGSTIAGGEGD
SESEDSNTIDVADPAFLDLLKDENDFITERHWTSPAIASALQAATSGVQSDRLKQSLKIA
PRLLDVYFAIALRDVNDSLICALIPMLMLRHAAIFPDKIFSYEVRKRLLEFMLASFQRSP
DFISLLKKPIVDRLSEAYDSQEKTELALQLCWAIGEHGGGGESHKDAARELFESLELLLY
ENLSSSRLGLRQGTTSTGSEKAGQSRLLCFVITAIAKLATYHRELLPRARVSLAKVVRSR
LSDARVWTRARDCLGLLNEPAICMSVLGSSRHPRGEKYPGTVNWSDGGTKMIAHVPFYIL
AGQAGPPFHDFAFSDILPNR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgtgatagaaactgggatttctacctccgaacactctcagcaagtgccagg
gactccacttcacctgcttccgacccttctcttcttgaatccgtaaagaagctttgtgag
ctttgtaaagctgagaagtctgatgatttagttgctcgaatttattcctccattatcaag
ctatttcaacgttctgttgcttctctctcccagtctcgctcttctcatggccttctcttg
ctggccattctccaatttttcttagactttggagagtctgttcttcatgatgctgatccc
agtctgaggacattttttcgttcttgcttgagccgtgatttcgctgaccctgtcattgca
gaggcgacaatcgaatttcttcttgtgaataagaagaagcttcagacttcatttccaact
gtgctacctcaattctttcccttgctattgaagctcattgcatggaatggagagaagatt
gagaaatcatttctgaagatatttcctgcactagtagctcccgggtcattcttggcttta
tttccagctatcgcagacttgcctgtcctggttgttgctcttgagaaggtggaaaaaagc
tctggaacactggttggtaacagcattgcttcaatcaagaatagtactgctcctgagatg
ctacttgccttaatggatgaggcatatactggctcaaccatagctggcggagaaggtgac
tctgaatctgaggatagcaatactatagatgttgctgatcctgctttccttgatcttctt
aaagatgagaatgactttatcactgaacgtcattggacatcacctgcaattgcttcagca
ttacaggctgctacaagtggtgttcagtctgaccggttaaaacaatcactaaagattgca
cctcgcctgctggatgtatattttgctatagccttacgcgatgtcaatgattccttgatc
tgtgcacttattcccatgcttatgttaagacatgctgctatattcccagacaaaattttt
tcatatgaggtcagaaaaagacttttggaatttatgcttgcttcatttcagcgatcacca
gattttatctcacttctgaagaaacctatcgtggacagacttagtgaagcttatgacagc
caagagaagacagagttggctttacaactttgttgggctattggagagcatggagggggc
ggtgaatctcacaaagatgctgctcgtgaactttttgaaagtttggagttacttttatac
gagaacctctcatctagccgtcttggtctaagacaaggcaccactagcacaggctctgag
aaggcgggacagtccagacttctttgctttgttataacagctattgccaaacttgctact
tatcaccgtgaattactacctagggctcgtgtatccttagcaaaggtagttcggtctcga
ttatctgatgcaagggtttggacaagggctcgtgattgtttgggtttactgaatgagcct
gcaatatgtatgtctgtgttgggatcgtcacgacatccccggggagagaaatatccagga
actgtgaactggagtgatggtgggactaaaatgattgctcatgtcccattttatatcttg
gctggacaagcaggccccccatttcatgattttgcattctcagacatccttccaaacaga
tga
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