Chenopodium quinoa (quinoa): 110721122
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Entry
110721122 CDS
T05764
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110721122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110721122
Membrane trafficking [BR:
cqi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
110721122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
110721122
NCBI-ProteinID:
XP_021755943
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MMVEGIEDEEKWLAEGIAAVQQNAFFMLRAVDSDNLREALKYSAQMLSELRTSKLSPHKY
FELYMRAFDELRKLELFFKDESRHGLSVSDLYELVQHAGNVLPRLYLLCTVGSVYLKSNE
ASCKDLLKDLVEMCRSVQHPIRGLFLRSYLCQVTRDKLPDIGSENEGVGDSVMDAVDFVL
QNFTEMNKLWVRLQHQGSARVKEKREKERNELRDLVGKNLHILSQIEGVDLEMYRDTVLP
RILEQVVNSKDELAQHYLMDCIIQVFPDEYHLQTLDVLLAACPQLQPTVDIKTVLSQLME
RLSNYAASSIEVLPDFLQVEAFAKLNNAIGKIIEAQIDMPIVGAITLYTSLLMFTLRVHP
DRLDYVDLVLGACVRKLSGKPKLEDSRATKQIIALLSAPLDKYNDAVTALTLSNYPRIMD
YLDNDTNKIMAMVIIQNILKNYTCISTADQVEALFELIKGLIKDTDGISVDELDEEDFSE
EQNSVARLIHMLYNDDPDEMLKIICTVQRHIMTGGQRRLPFTVSPLVFSALKLVRRLQGQ
DGEADGEEAPVSPKKIFRLMNQTIEALSSVPSPDLALRLYLQCAEAASDCDLEPIAYEFF
TQAFILYEEDIADSKAQFTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKADQC
RAVYACSHLFWADDQDGIKDGERVLLCLKRSLRIANAAQQMANVTRGSSGPVTLFVEILN
KYLYFFEKGNPKVTSSAIQGLVELIRTEMQSDTSTPDIAATAFFNSTLRYIQFQKQKGGV
MGEKYDPVKL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcgaaggaatcgaagacgaagaaaaatggcttgctgaaggaatcgccgctgtt
caacagaacgccttcttcatgcttcgtgctgtggattcggataatcttagagaagctctc
aagtactccgctcaaatgctttcggagctccgaacctctaaactttctcctcacaagtat
ttcgaactctatatgcgagctttcgacgaattgaggaagctggaattgttctttaaggat
gagagcaggcatggtctttcagtttctgatctctatgaacttgttcagcacgctggcaat
gtgttaccacgtctctacctgctttgtactgtgggttctgtttatctcaaatcgaatgag
gcttcctgtaaagatcttctgaaagaccttgttgagatgtgtcgttctgttcaacatcct
attcgtggtcttttcttgaggagctacctttgtcaagtcacaagagacaagcttcctgat
attggttctgagaatgaaggagttggagattcagtgatggatgctgtggattttgtgctg
caaaacttcacagagatgaataaactttgggttcgtttgcagcatcaggggtctgctcgg
gtaaaagagaaacgagaaaaggagaggaatgagcttcgtgatcttgttgggaagaatttg
catatactaagtcaaatagagggtgttgatcttgaaatgtacagagatactgttctcccc
agaatcctagagcaggttgtaaattctaaagatgagcttgcacaacattatttgatggac
tgtataatccaagtttttccagatgagtatcacttgcaaacgcttgacgtattattagct
gcttgtcctcagcttcagccgacagttgacatcaaaactgtgctatctcagctaatggag
agactttcaaactatgctgcatcaagtatagaagtattacctgatttcctgcaagtggaa
gcttttgctaaattaaacaatgccattggaaagattatcgaggcacaaattgacatgcca
attgttggagccatcactctatacacctctcttcttatgttcactctccgtgttcaccct
gatcgcctggattacgtggatctagttctgggtgcatgtgtcaggaaactttcagggaag
ccaaagcttgaagacagccgagcaacaaaacagattattgcactactaagtgctccactg
gacaagtataatgatgcagttacagcacttacactttctaattatccccgcatcatggac
taccttgataatgacaccaacaaaattatggcaatggttatcatacaaaacatcttaaag
aattacacttgcatttccactgctgaccaggtagaggcactattcgagttgatcaaggga
cttatcaaagatacagatggaatctcagtggatgagctagatgaagaggatttcagcgaa
gaacagaattctgttgcgcgtcttatccacatgctatataatgatgaccctgatgagatg
ttaaagattatatgtactgtgcagagacatatcatgacaggaggacaaaggcggttaccc
ttcactgtttcacctcttgttttttctgcactaaagttggtcaggcggttacaaggtcaa
gacggtgaggcagatggggaagaggcacctgtgtcgcctaaaaaaatattccggttaatg
aatcagactatagaggctctttcatctgttccatcccctgatcttgcattgaggctgtat
ttgcaatgtgctgaggctgccagcgattgtgaccttgagccaatagcatatgaatttttt
acccaagcatttattctctatgaagaagacattgcggactccaaagcacaatttacagcc
atccatcttataattggtactctacaaaggatgaatgtgtttggtgtggagaacagagat
actctgacacataaggcaacagggtactctgcaaaacttttgaagaaggccgaccaatgc
agagccgtttatgcatgctctcatctcttttgggcggatgatcaagatggtatcaaggat
ggagaaagggtcttgctatgcctcaagcgttctttgcggattgcaaatgctgctcaacag
atggcaaatgtgacacgtggaagtagtggaccagttaccttgtttgttgaaattctgaac
aagtatctctacttcttcgagaagggaaatccaaaagttacaagttcagcaatccaaggc
cttgtagagttgataagaactgaaatgcaaagtgacacatcaactcccgatatagccgcc
actgccttttttaacagcactttgcggtatatccaattccagaaacagaaaggaggtgta
atgggtgaaaagtacgatccagttaagctatga
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