Chenopodium quinoa (quinoa): 110721137
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Entry
110721137 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28-like
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110721137
03009 Ribosome biogenesis [BR:
cqi03009
]
110721137
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110721137
Spliceosome [BR:
cqi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110721137
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
Pre-60S particles
Helicases
110721137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ARTD15_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
110721137
NCBI-ProteinID:
XP_021755961
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MGSGFVFEPPSDEELEDDIHSGDDNASESAWDFAAYSEAVAEEHARRHTTSVDQKIHKLR
QQRAVSLPNPNDSDSDSESNKQEDYKAEKGDDDENDVVESDKPFFAAAEGVSYQAKSFLE
LNLSRPLLRACEALGYSKPTPIQAACIPLAMAGRDICASAITGSGKTAAFSLPTLERLLY
RPKRVPAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLIVGGLSNKVQEAALRSMPDV
VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFNAEIQELVRMCSKRRQTMLFS
ATMTEEVAELVKLSLKKPLRLSADPSAQRPAALTEEVVRIRRIREAHYEAVLLALCSKTF
TSKVIIFSGTKLAAHRLKILFGLAGLKAAEFHSHLTQAQRLDSLELFRKQEVDFLIATDV
AARGLDIAGIRTVINYACPRDLTTYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKKA
GSRLKSRIVAEDSINKWAQTIEQMEDQVATILQEEKEEMALRKAEMEAAKAENMIEHREE
IFSRPKKTWFITEKEKNLIAKEVKGSSETKKKSGNVIVSAKQAEDLKLKEKRKQEREKNL
PRKKRRKLEAEREMLEEENESDDSEGENKKSKKDKSGIPLVNVAYRKAKAIKAGKKAQDG
GKNIKKMGKKAAQPQSRTDEMQELFQTDMSEKRGKKNLQHVQKKSRNSFKSKSRYKRR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaggcttcgtattcgagcctcctagcgacgaagaactcgaagacgacattcat
tccggcgacgataatgcctccgaatctgcctgggacttcgccgcctactccgaagccgtc
gctgaagaacacgcccgccgtcacaccacctccgtcgaccaaaaaatccacaagcttcgt
caacagcgcgccgtctctctccctaaccctaacgactccgactccgactccgaatccaat
aaacaagaggattacaaggctgagaaaggagatgatgatgaaaacgatgttgttgaaagt
gataaacctttctttgcagctgctgaaggtgtttcctatcaagctaaatcgtttttggag
cttaatctttcgaggccgttgcttcgagcttgcgaagcgttagggtactctaagcctaca
ccaatccaggctgcttgtataccattggcaatggccgggcgtgatatttgtgcgagtgca
ataaccggttctgggaagaccgcagctttttcattgccaaccttggagaggttgttatac
cgcccaaagcgtgtgccggcaattagggttcttattcttactcctacaagggagctagct
gtccaggttcacagtatgatagaaaaacttgctcaatttacagatataagatgctgcctg
attgttggtgggctatcaaataaggtgcaagaggctgcattaaggtcgatgccagatgtc
gttgtggcaactccagggcgtatgattgaccatttacgtaattcaatgtctgtggatcta
gatgatcttgctgtcttgattcttgatgaggctgatcgacttttggagcttggatttaat
gctgagatccaggaactcgtccgtatgtgttcaaaacggaggcagacaatgctgttttct
gccacaatgactgaagaggttgcagagcttgtcaaactatccttaaagaaaccactacgg
ttgtcagctgatccgtctgcccaacgaccagcagctttgactgaggaggttgtgagaata
agaagaattcgtgaagcacattatgaggcagtgcttcttgcattatgctcaaaaacattc
acatccaaagtaatcatttttagtggaaccaagcttgctgctcataggttgaagatctta
tttggattagcaggcttaaaagcagccgagtttcatagccatcttacacaagcgcagcgt
cttgattctcttgagcttttcagaaaacaggaagtagacttcttgattgcaacagatgtt
gctgctcgagggcttgacatagctgggattcggacagttattaattatgcttgtcctcgt
gatctcacaacatatgtacaccgagtgggtcgtacagcaagagctggtcgggaaggatac
gcagtcacatttgtcactgataatgatcgctctctactaaaagccattgctaaaaaggct
ggttctaggttaaagagcagaattgttgctgaagattcaattaataagtgggcgcaaaca
attgagcagatggaagatcaggttgctactattcttcaagaagagaaagaagaaatggct
ttgagaaaagcagagatggaagcagcaaaggctgaaaatatgattgagcacagggaagaa
atattttcccggcctaaaaagacgtggtttataacagagaaagaaaagaacttaattgca
aaggaggtgaagggatcctcggagacgaagaaaaaatctggtaatgtcattgtcagtgcc
aagcaagcagaagatttgaaattgaaggaaaagaggaaacaagagcgtgagaaaaacttg
ccccggaaaaagcgcagaaagctggaagcggagagagagatgctggaagaggaaaatgag
tctgatgattcagaaggggagaataaaaagagtaagaaagataaaagtggaataccgctt
gtcaatgttgcctatcgcaaagcaaaagcaatcaaggctgggaaaaaagcacaagatggt
ggtaaaaatatcaaaaagatggggaagaaagcagcacaacctcagtcaagaacagatgag
atgcaggagctattccagactgatatgagtgagaaacgggggaaaaagaaccttcagcat
gttcaaaagaagtcaagaaattcatttaagagtaaatcgaggtataagcgaaggtag
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