KEGG   Chenopodium quinoa (quinoa): 110721221
Entry
110721221         CDS       T05764                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110721221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqi03041]
    110721221
   03036 Chromosome and associated proteins [BR:cqi03036]
    110721221
Spliceosome [BR:cqi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110721221
 Complex B
    110721221
 Complex C
   U2 SnRNP specific factors
    110721221
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    110721221
SSDB
Motif
Pfam: SF3b1 HEAT_EZ HEAT Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N UME
Other DBs
NCBI-GeneID: 110721221
NCBI-ProteinID: XP_021756066
LinkDB
Position
Unknown
AA seq 1276 aa
MASIDPEIAKTQEERKKMEQELASLSSLTYDTDLYGSSGREDYVQSIPVDDDEDNADAMD
NEVARKLASYTAPKSLLKEMPGAGADYDDGLRKPQRIIDREDDYRRRRLDRVISPARHDA
FAMGDKTPDVGVRTYADVMREEALRRDKEETLRLIAKKKKEEEEQKKSLEEEKGAGGGVA
AQAQPSQKRRNRWDQSQDQQGDEGVAKKAKSSSDWDLADSTPGIGRWDATPTPGRLGDAT
PSARKNRWDETPTPGRAQDSDSTPSAGGLTPGATPAGSTWDATPKITGMATPTPKRQRSR
WDETPATMGSATPMAGATPAAMTPGVTPVGGVDMATPTPGQINLRGPVTPEQYNLMKWEK
DIEERNRPLTDEELDSMFPPEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYQIPVED
RNQQFDVGKEPANGLPFMKPEDYQYFQALLNDENEEELSPEEQKERKIMKLLLKVKNGTP
PQRKTALRQLTDKAREFGAGPLFNQILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP
FVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTA
RAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEI
IEHGLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKA
IGFIIPLMDALYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSD
ILPEFFKNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVM
ETIEKVVTNLGASDIESRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPY
LPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPE
VLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE
FVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQN
RVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYA
VTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVIN
AVTEAIEGMRVALGAAAILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPTLE
NEGENIYSRPELLMFV
NT seq 3831 nt   +upstreamnt  +downstreamnt
atggcgtcaatagacccagagatagcaaaaactcaggaggagaggaagaagatggagcag
gaactagcctcactttcatctcttacctatgatactgatctttatgggagtagtgggagg
gaggattatgtccagtcaatccctgttgatgacgatgaagataatgccgatgctatggat
aatgaggtggctcggaaattggcttcttacacggctccgaagtctcttttaaaggaaatg
cctggtgctggggctgactatgatgatgggttgaggaagccacaaaggattattgatcgt
gaggatgattatcggaggaggaggcttgatcgggttatttctcctgcgaggcatgatgct
tttgcaatgggggataagaccccggatgttggtgtcaggacttatgctgatgtgatgagg
gaggaggcgctgaggagagataaggaggagacgttgcgattgattgctaaaaagaagaaa
gaagaggaggagcagaagaagagtttggaagaggagaaaggagctggtggtggtgttgct
gctcaagctcagccttctcagaagaggagaaataggtgggatcaatctcaggatcagcaa
ggggatgagggtgtagcaaagaaagcgaagtcttcctctgactgggatttagccgattct
acccctggaattggaaggtgggatgccactcctacaccagggagacttggcgatgctaca
ccatctgctcggaagaataggtgggatgagacaccaactcctggccgtgcacaagattct
gattctactccgtctgctggtgggctcactcctggtgccactcctgctggatcgacttgg
gatgccactccaaaaatcactggtatggcaacaccaacaccaaaacgtcagagatcaagg
tgggatgagactccagctaccatggggagtgcaacacccatggctggggcaactcctgcg
gctatgacccctggtgtgacacctgttggtggagttgatatggctacacctactcctggg
cagattaatctgcgtggccctgtaactccagaacagtataacttgatgaagtgggagaag
gatattgaagagaggaacagacccttgactgatgaagagcttgattccatgttcccacct
gaaggatataagatcttggatcctcctgcttcatatgtgccaattaggactccagcaagg
aagcttcttgccacacccactccaatggggactccactttatcaaataccagttgaagac
aggaatcagcaatttgatgttggaaaggagcctgctaatgggttgccatttatgaaacct
gaggattatcaatattttcaggcgttgttgaatgatgaaaacgaggaagagctgtcaccc
gaggagcagaaggaaagaaagattatgaagttgctacttaaagtgaaaaatggtactcct
cctcagaggaagactgcattgcgacaactcactgacaaagcaagagaatttggtgctggt
ccgttgtttaaccaaattttgcctctgcttatgcagccgacattggaagaccaagaacga
catcttcttgtgaaagttattgacagggtgctgtacaagcttgatgagttggttcgacct
tttgtgcacaaaattcttgtggttattgagccactcttaattgatgaagactactacgct
cgtgttgaggggagggagattatttcaaacttgagcaaggctgctggattggctactatg
attgctgccatgagaccggatattgataatattgatgagtatgtcaggaatacaaccgca
agggcttttagtgttgttgcttcagctctaggtatacctgccctgttgccatttttaaag
gcagtttgtcaaagtaagaagtcatggcaagctaggcatacaggtattaagattgtccaa
cagatagccattttgattggttgtgctgttctgccgcacttaagatctttggtggagatc
atagaacatggtcttaatgatgagaaccagaaggtcagaacaattactgcgctttctctg
gcagctctagctgaggcttcagccccgtatggtattgagagttttgactctgtattgaaa
cctttgtggaaaggtatcagatcacaccgtggaaaggtcttggctgcattcctgaaggcc
atcggttttatcattccgttgatggatgctctttatgctagctactatacaaaagaagtt
atgtttattcttattcgagagttccagtcaccagatgaagaaatgaagaagattgttctg
aaagtggttaagcagtgtgttagcactgagggtgtagaggctgactacattagaagtgat
atccttcctgaattctttaagaacttttgggttaggagaatggctcttgaccgaagaaat
tacaagcagcttgtggaaactactgtagagatagccaacaaggttggcgttgctgatata
gttggtaggatagtggaggatcttaaagatgagagtgaaccctataggcgtatggtcatg
gagacaatagagaaagttgtgacaaacttgggggcatctgatattgaatctcgcttggag
gagcttctgattgatggtattctgtacgcctttcaagagcagacaagtgatgatgccaat
gtcatgcttaatggttttggtgctgtggtcaatgcccttggccaaagggtcaaaccttat
ctcccccagatatgtggtacaattaagtggcgtttgaataacaagagtgcaaaagtaaga
cagcaggctgctgaccttatctcccgaattgcagtggttatgaaacagtgtggagaggag
cagcttatgggacacttgggtgtggttttgtacgagtatctaggagaggagtatccagaa
gtgctgggttcaatcttgggagcactgaaagcaattgttaacgtcattggtatgaccaag
atgactccaccaatcaaagatctgctacctaggttgactcctattttaaagaacaggcat
gagaaagtacaggagaactgcattgatcttgtgggacgtattgcagatcgtggagcagaa
tttgttcctgcaagagagtggatgaggatatgctttgagcttctggagatgctcaaggct
cacaagaaaggaattcgaagagccactgtcaacacctttgggtacatcgccaaagctatt
ggacctcaggatgtcttggctactcttcttaacaaccttaaggtgcaagaacgtcagaat
cgtgtttgtacaaccgtggctattgcaatcgttgctgagacttgctcacctttcaccgtt
ttgccagctcttatgaatgaataccgtgttcctgagcttaacgtgcagaatggtgtcctc
aaatctctgtctttcctctttgaatatattggtgaaatgggaaaggattatatctatgcc
gtgactcctctccttgaagatgctcttatggacagggacctggttcatcgtcagactgca
gcttctgccgtgaaacatatggctcttggtgttgcaggtctaggctgtgaagatgctttg
gtgcaccttatgaattacgtgtggcccaatatcttcgagacttcacctcacgttattaac
gctgttacagaagccattgagggaatgagagttgcattgggtgccgctgcaatactgaac
tactgtctgcagggtttgttccacccagcaaggaaagtaagggaagtctactggaagata
tataattctctgtatattggagctcaggatgctcttgttgctgcttatccgactttggaa
aatgaaggagaaaacatttatagtagacccgagttgttgatgtttgtgtaa

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