Chenopodium quinoa (quinoa): 110721419
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Entry
110721419 CDS
T05764
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2 subunit KU80-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110721419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110721419
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
110721419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
INTS1_INTS2-bd
Motif
Other DBs
NCBI-GeneID:
110721419
NCBI-ProteinID:
XP_021756253
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MWDIIGNCKFLPRWYFFKRQNSEKSVVSQKSPCFHGTLKRLQQSLSSPQSTFLKFSLFSQ
LTMARNKESLVLLLDVGPKMHGVLLQVEKVCAMLLEKKLIYNKYDEVGIVLFGTAETNNE
LTKEVGGYENIVVLRSIKVVDGDLVDVLDQIPRGTVPGDFLDAIIVGMDMLIKKYGPTNK
GKKRLCLITNALSCLRDPYEGTKEDQVSTIAQQMTEQAIKLECVVVRGKLSGDADKNVMD
ENDQLLELFTKRTWAKTLYVESATSLLRALRTRSIAPVTIFRGDLEVSSALKIKVWVYKK
TSEEKFPTXKAPATDKFATREIKVDYEYRSINDPETVVPPEQRIKGYRYGPEVVPVSSDA
WEAVKFKPEKSVKLLGFTDAKNILRQYYMKDVNIFIAEPGKREAVTAISALARAMKEMNK
VAIVRCVWRQGQSGVVIGVLTPNVSVKENIPDSLYFNVLPFIEDLREFQFPSFKNLPTFQ
PTEEQQAAADNLVMMLDLAPPAKEENLKPDLTPNPVLERFYHFLELKAKDPDAAVPLLDE
ALKKITEPDAELLSQNKSVIDEFRRCFELKENSTKKKSTRSVKEKPSGSDDEKDAAEDHN
VGKTLTNTDDNTAGKAEISDEKPSSALANNSSVSVEKIGNITSVQDFEAMLSRRDSPDWI
TKAIKGMRSKILELLEDSFGGSNYDKAVECLVALRKGCVLEQEPKQFNDYLQYLCKFCKE
HGLNDFHELLDLKGMTLITKSEAVDSDVADEAARSFLVTKEPKVE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacataatcggaaattgcaaatttttgcccaggtggtacttttttaagcggcaa
aattctgagaaaagtgtagtatctcaaaagtctccgtgttttcatggcacattgaagcgt
cttcagcaatctctctcatctcctcaatcaacatttctgaaattctctctcttttctcaa
ttaacgatggcgcgcaacaaggaatcactggtcctattgcttgatgttggtccaaaaatg
catggtgttctcctacaagttgagaaagtttgtgccatgcttttggagaagaagctgatt
tataacaaatatgatgaagtgggaattgtcttatttggaactgcagaaacaaacaatgag
ctcactaaagaagttggcggatatgaaaacattgtggttctgagaagtataaaagttgta
gatggagatctggttgatgtactggatcagattccacgaggaacggttcctggtgatttt
cttgatgcaattattgttggtatggatatgctaataaagaagtatggaccaactaacaag
ggaaagaaacgcctttgcctaatcactaatgcactctcttgtctgagagatccatatgaa
ggcacaaaagaagatcaggtcagcactattgctcagcaaatgactgagcaggctataaaa
ttggaatgtgtagtagttagagggaagctaagtggtgatgctgataagaacgttatggat
gagaatgaccaactattagaacttttcacaaagagaacttgggcaaagactctttatgtt
gaaagtgcaacttcgttgttaagagcactcaggactcggagcatagcccctgttacaata
ttcaggggtgatcttgaagtgagctctgcactgaagattaaggtctgggtatacaagaaa
acttctgaagaaaaatttcctaccnctaaagcacctgcaactgataaatttgccacccgt
gaaatcaaggtggactatgaatatagaagcattaacgaccctgaaacagttgtgcctcca
gagcaaaggatcaagggttatcgttatggaccagaagtggttcccgtatcatctgatgca
tgggaagctgtcaaattcaaaccagagaagagtgtgaagctcctaggatttactgatgct
aaaaacatactacgccaatattacatgaaagatgtcaatatattcattgctgaacctggc
aagagagaagctgttactgcaatttctgcattagctagagcgatgaaggaaatgaacaag
gttgccatagttcgctgtgtttggaggcaaggacagtcaggtgttgtgattggagtcttg
acaccaaatgtatctgtgaaggaaaatattcctgattcattgtacttcaatgtactcccg
tttattgaggatcttcgagagttccaatttccttctttcaaaaatctcccaacatttcag
ccaaccgaagaacagcaggcagctgctgataatctagtaatgatgcttgaccttgcacca
cctgccaaagaggagaacttaaagccggacctcacaccaaatcctgttctcgagcggttt
tatcactttcttgaactaaaagcaaaagacccagatgctgctgtgcctctacttgatgaa
gccttgaaaaaaataactgagcctgatgcagaattactatctcaaaacaagtctgtcatt
gatgaatttcgaagatgctttgaattaaaggagaactctacgaagaagaaatcaactagg
tctgtcaaagagaagccatctgggtcagatgatgagaaagatgctgcagaagaccataat
gtggggaaaacattaacgaacaccgatgataatactgcaggtaaggctgagatcagtgat
gagaaaccatccagtgctctggcaaataattcttctgtcagtgttgagaagattgggaac
attacctcagtccaggattttgaagctatgttatctcgcagagatagcccagattggata
actaaagcaatcaaaggtatgcgaagcaaaattcttgaactgttagaggactcatttgga
ggaagtaactatgacaaagctgtagagtgtctcgttgccctccgaaaaggctgtgtcctt
gaacaagaaccgaaacaattcaacgattatctacagtatctttgtaaattttgcaaggag
catggcctgaatgattttcatgagctccttgacttaaaagggatgacattaatcacaaaa
tcagaagccgtagacagtgatgtggcagatgaagcagcacgaagttttctggttaccaaa
gagcccaaagtcgaataa
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