Chenopodium quinoa (quinoa): 110721494
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Entry
110721494 CDS
T05764
Name
(RefSeq) nuclear pore complex protein NUP62-like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110721494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110721494
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110721494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
COG3_N
FapA
DUF677
APG6_N
ACBP4_C
DUF16
Motif
Other DBs
NCBI-GeneID:
110721494
NCBI-ProteinID:
XP_021756347
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MAGFTGFSFTNTSSTSSSSSSPSPFSLSPSPSPFAANPTSSAAPSPSPFSASSTPSFAGF
SASSAASSAPSLSFGAASSSSATPSFGFGSSTPAFGVASSATPSSSAAPSLGFGAASGFG
SSSTPLFGFGSSATPPSSSAATPAFSFSPAAASTTSSASTPSSFFASAASSSAASSSFFA
SASSSAAAPSSLFGSASSAAPSSLFGSAASSSAAPSSLFASASSSAAAPSSLFGSAASSS
SATSTGAFSFLNTQTATASSPSTAFPFTPPASSAAASTNSSSSLFNFNNAATASASKPLF
GATPTPATPPSAAATTLFSTPTTTATTTPSSPFAAATTTPAASTQPPAAAAATSTSPSAF
TGFSLNSSSQPAATAAASTASSAFTGFSLNSSTVATPAASASVPAAAAASPAATAFTGFG
VSSGSSSLSNATASFPSFTIPTTKATTPALASQSQPQQTASTITTSTAAASTATTAPATG
FLATTSVSAAISSSTTTAVQTSSVVAVASSSGTTSAVSTPVTSAPTPKLPSEITGKTVEE
IIKEWNSELQDRTRKFQKQANAIADWDKRILQNRDVLLRLETEVAKVVETQSNLERQLEL
IETHQQEVDKALDSIEEEAERIYKDERNLLLDDEAASTRDAMYDQAESVERELEHMTEQI
KSIIQSLNASQGGELDTTEGMSPLDVVVRILNNQLSSLMWIDEKAEEFSFRIQNLASEGS
AADRELVAPRLWG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgggattcactggtttctccttcaccaacacttcttcaacctcctcttcttcttcc
tctccctccccattttctctctccccttccccctctcccttcgccgctaaccctacctcc
tccgccgccccctctccttcccccttcagcgcctcctccaccccctccttcgccggattt
tccgcctcctccgccgcttcctccgccccatcactcagtttcggtgccgcatcttcctcc
tccgctaccccttcattcgggttcggatcctccactcccgcattcggggttgcatcctct
gctacaccttcctcctccgccgccccatcactcggtttcggcgccgcatccgggttcggg
tcttcctccactcctttattcgggtttggatcctctgctacaccaccttcctcctccgct
gcaactcctgccttctctttctctcccgccgccgcttctaccacctcctccgcttcaaca
ccatcttctttctttgcgtctgctgcttcttcttctgctgcatcgtcgtctttctttgcg
tctgcttcttcttctgctgctgcaccgtcgtctctatttgggtcggcttcttctgctgca
ccatcgtctctatttgggtcggctgcttcttcttctgccgcaccgtcgtctctatttgcg
tcggcttcttcttctgctgcagcaccgtcgtctctatttgggtcggctgcttcttcttca
tctgctacttctacaggtgcattttcattcttgaatactcaaacagcaacagcttcatcg
ccttctacggcgtttccctttacgccaccggcttcgtctgctgctgccagtactaattca
tcatcttcattgttcaatttcaacaacgccgccaccgcttcggcttcgaagccgctcttt
ggtgccactcccactcctgctactcccccatctgctgccgcaacaacattgttctcaact
cctaccactactgctactacaaccccttcttctccctttgctgctgctactacaacccct
gctgcatcaactcaacctcctgctgctgctgctgctacatcaacttccccatctgcattc
actggcttttcactgaattcatcatctcaacctgctgctactgctgctgcatcaactgct
tcatctgcattcactgggttttcactgaattcatcaactgtggcgacaccagcagcttct
gcttcggttccggctgcggctgcggcttctccagcagcaactgcgtttactggttttggg
gtctcatctgggtcttcttccttgagcaatgctactgcttcgtttccgagttttactatt
cctacaactaaggctactacccctgctttagcttctcaatctcagcctcagcaaactgct
tctactattactaccagtactgctgctgctagcactgctactactgcccctgctactggc
ttcctggctacaacttctgtctcagcggccatctccagctctacaacaactgctgtacaa
acatcttctgttgttgctgtagcctcaagtagtggaactacctctgctgtgagtacccct
gtaacatctgctcccacccccaagttgccctctgagatcactggaaaaactgttgaagag
atcatcaaggagtggaactctgaattacaagaccgtactagaaaattccagaagcaggct
aatgcaattgctgattgggacaaaagaatcttgcaaaaccgagatgtacttctacgactt
gagaccgaagtagcaaaagtggttgagacccaatccaatttggaaagacagctggagtta
atcgagactcatcaacaagaggttgataaagctttggatagtattgaagaagaagccgag
cgtatctacaaggatgaacgaaatttgcttctagatgatgaagctgcatccaccagagat
gcaatgtatgatcaggcagaatctgttgaaagggagctagaacacatgacagagcagatt
aaatcaattattcagtccctgaatgctagtcagggtggagaacttgatacaactgaagga
atgagtccattagacgtggtggtgaggatcttgaataatcaattgagttctctgatgtgg
attgatgaaaaggcagaagagttttcatttcgcatccagaatcttgcaagtgaaggttca
gctgctgaccgtgagctagtggccccaagattgtggggttaa
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