Chenopodium quinoa (quinoa): 110721835
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Entry
110721835 CDS
T05764
Name
(RefSeq) E3 ubiquitin-protein ligase listerin-like isoform X1
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cqi03009
]
110721835
04121 Ubiquitin system [BR:
cqi04121
]
110721835
Enzymes [BR:
cqi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110721835
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110721835
Ubiquitin system [BR:
cqi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110721835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
UBC_like
LTN1_E3_ligase_6th
HEAT_GCN1
zf-RING_2
zf-rbx1
FANCL_C
zf-ANAPC11
zf-C3HC4
zf-C3HC4_2
zf-RING_16
MMS19_N
RINGv
zf-RING-like
ParcG
IBR_1
C1_1
Motif
Other DBs
NCBI-GeneID:
110721835
NCBI-ProteinID:
XP_021756727
UniProt:
A0A803MF98
LinkDB
All DBs
Position
Unknown
AA seq
1889 aa
AA seq
DB search
MGKQKGESARTKARASSSSLAASLVPTGSAPIGFGGYVGSSRVDSVHGDESTSFAGVDGE
MVQYLKRLARKDPVTKIKALNSLSALLKNKSGKDVLPIIPQWGFEYRRLLMDYNREVRRA
THDTMTSLVSAAGRDLALHLKSLMGPWWFAQFDSVSEVSQAAKRSLQAAFPTQEKRLEAL
IFCASEVFEYLEENLKLTQQGMADLAAASDELADMHQRVISSSLLALATLLDVLVGVQSE
KPAIEDSNIQSTKVSKARDMAISSAKTLFVSHHYFLDFLKSESPAVRSATYAVLRSFVKN
ICEVFSEEDVKGLATAILGAFQEKDPSCHTALWETFLLFTRRFSGSWSYINFQKIFSNRF
WQFLKNGCCGSQQVSYPALVLLLDALPAEVTGGQKYFVDFFQNLWAGRNASHPSNADRLA
FFVALKECLLWVLHNCGRYCSGDDAIYNFRMSLVDNVLVKLLWHDFLVYSEARHEDVSTS
SIDGDALSETSRLLDKSQLEVKKGQLHDLGCCIIDVLSAIYSLECKLLNPFCEAFQGCCL
ETFQQTEHVKEASGNIGRAIKFLMLVEKYAVLRNESWLLDYLVGPMLERSLPLIISHESV
EVVKFLSVVVSIFGPRKIVLRLVPTEGIVDGSATGQDDREASKFLRVFEETFVSWCFSES
ESAMDARLDLLLALLDNKCFKQQWNIIITYATNMYHSASSHIERFSILIEKARKLTKRLS
KLGDDPISHISNWRHELLDSIAVTMMQNAPTSADSDLQFIRAVLGGTSEEDDTSFLSKNA
VVQIYTEAFGKLVAYAMESPFACVRKFGSISCSLMKSTTSQIQNSADVVRMAYTSLEVLR
STLFSLKSYCEESELLLGIGGIIFVIDWEYDVSRASDTKHNGASAKSIMPRQEFGKVMHA
FRTSTSKQFWRSLVSQSRMTLGNFLIQFIRSAIFEQDVFDAGMITSLCCKWMIEVSNHLC
LNQLEEQKLVELLLNDDESWPLWVTPDNRNNERKHAFKVEGVLTDIHISQSQVFVALVDK
LISEMGINRMVVGSDLQALAAEERGGNGLVSSQHEFSRAWVVAEMLCNWKWPNGSALDTL
LPSLSSHAKSESDGSLICLFDSTVNILLEGALVCGTKSQLSFFNTWPPSSKDLDDIEEPF
LRALVTLLFTLLNEGIWNQEKAVGLWELLLNKLYVGQEANMNCLRILPPLVSVLARFLFH
NKGSSDLVKDSLPDSFRETIVQDWLEKTLTFPSLISWTSGEEMEEWFQLVLSCYPLSTTA
DVGHLKLDASSLEQKILLDVFRKQRHDANSLFVTNELPVVSLLLSRLMVIAVGYCWEEFD
EEDWKFVLSNLRHWIELVVTTMEEAIECLDLETGNKSDDNLDLVISKLKKIIQNLDTSLM
NIATNALYAFSLVMELVGCNALEKAEKLTVLKTEVCHQTIDLVQEGVLRIFFSIGIAEAI
SSLLSCRSLSIIARSHHIYPHFWNLVSSIALKSSTHSREQAFKAVELWGLRTGAVSSLMA
ILFSPKPVSVLQLTSFVLLSSQPFSSLALVDDHISDSSSSTVDVESRDLDLSSENNFTLR
EGLHCLIHKLPLDVLGMDLEAQERVHVFLAWCLILSYLVSLPSSSSNREKLVQQIEESAS
SAILDCLFQHIPVELCTAHSLKKRDLETPPELVNIATSATRAISTGSILFAVESLWPIGP
EKMASLAAAIFGLMLRVLPAYVRVWFNDLRDRYSSSAIESFTKTWCSPHLMVDELSQIKK
SDFVDECFAVSVSKSANEVIATYTKDETSMDLVIRLPASYPLRSVDVECTRSLGISEVKQ
RKWLLSMMAFVRNQNGALAEAIRIWKSNFDKEFEGVEECPICYSVIHTTNHSLPRLACKT
CKHKFHAACLYKWFSTSHKSTCPLCQSPF
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacaaaagggtgaaagtgctagaaccaaagctcgtgcttctagcagcagtctt
gctgcttcgttggtgcctacgggttctgccccaattggttttggaggttatgtggggagt
tcccgggttgattctgtacatggagatgaatccacttctttcgcgggtgttgatggtgag
atggtacaatacttgaaaagacttgctcgaaaagatcccgtcacaaagataaaagcatta
aattctttatcagccttactgaagaacaagtctgggaaggatgtattaccaataattcca
cagtggggttttgaatacaggaggcttttgatggactacaacagagaagttcgacgggca
actcatgacactatgacgagccttgtttctgctgctggacgggatttggctctgcatctt
aagtctttgatgggaccatggtggtttgctcagttcgattctgtttctgaagtttctcaa
gctgcgaagcgatcactacaggctgcctttccaacccaggagaaaagactagaggcactg
atattttgcgcttctgaggtatttgagtatttggaagaaaatttaaagcttacacagcag
ggtatggctgatcttgctgccgcttcagatgagttagcagatatgcaccaaagggttata
tcgtcatcattactagctcttgctacactactagatgtattggttggtgttcaatcagag
aaacctgctattgaagactcaaacattcaatcaacaaaggtatcaaaagctcgagatatg
gctatttcttctgccaagactttgtttgtgtctcatcattattttctggactttcttaaa
tctgagagccctgctgttcgctcagctacatatgcagtactcagaagtttcgtcaagaat
atatgtgaagtttttagtgaagaagatgttaaaggtcttgctactgcaatacttggtgcc
ttccaagaaaaggacccatcttgtcatacagcgttgtgggaaacgtttttgctgtttacc
agaagattttctgggagttggtcatatattaactttcaaaaaatcttttcaaatcgcttt
tggcagttcctgaaaaatggatgctgtggatcacagcaggtgtcataccctgctttggta
cttctcctagatgctttgccagctgaggtaactgggggacagaagtactttgttgacttc
ttccaaaacctatgggcaggaaggaatgcatctcaccctagtaatgctgatcgcctggca
ttttttgtggcccttaaagaatgtctcctttgggtcttgcataattgtggaagatattgt
agtggagacgatgcaatatacaatttccgtatgtctcttgttgataatgtacttgtgaag
ttattgtggcacgatttcttggtctactctgaggcaaggcatgaagatgtcagcacttcc
agtattgatggagatgctctttcagagacctctagattgttagacaaaagtcaactggag
gttaaaaaagggcagttgcatgatctggggtgctgcataattgatgtcctttctgctatc
tactctttggaatgcaaactgctcaatccattttgtgaagcatttcagggctgctgcctt
gagacatttcagcaaacagagcatgtaaaggaagcttctgggaacataggaagagccata
aaatttttgatgttggtggagaagtatgcagttttaagaaatgaaagttggctcttggat
tatctagttgggcctatgctggaaaggtctcttccattgattatatcccatgaatctgtt
gaggtggttaagtttctctcagttgtggtttcaatctttgggccaaggaaaatagtattg
agacttgttccaactgaaggaattgttgatggcagtgccactggtcaggatgatagagaa
gcaagcaagtttctgagagtttttgaggagacatttgtctcttggtgtttcagtgaaagt
gagagtgccatggatgctcgcttggatcttttgcttgcattactggataataaatgtttt
aaacagcagtggaacattattatcacatatgctaccaatatgtaccattctgcatcgtcc
catattgaaaggttttcaattcttattgaaaaggctaggaagctgacaaaaaggctgtca
aaacttggtgatgatccaatctctcatatttcaaattggcgacatgaactgctggattca
attgctgttactatgatgcagaatgctccaacctctgcagattctgatttgcagtttata
cgggctgtacttggtggtacatcagaggaggatgatacttcttttctgtctaagaatgcc
gtcgttcagatatacacagaagcatttggaaagcttgtagcttatgctatggagtctcct
tttgcttgtgtaaggaaatttggttctatttcttgttctcttatgaagtccactacatca
cagattcaaaattctgcagacgtggttaggatggcttacacttctctagaagttctcaga
agtaccctttttagcttgaaatcatattgcgaggaaagtgagttgcttcttggtattgga
ggcattatctttgtgattgattgggaatatgatgtgtcaagagcatcagacaccaagcac
aatggtgcttcggcgaaaagtatcatgcccaggcaagagtttggtaaagtgatgcatgct
ttccgtacaagtacgagtaaacaattttggagaagccttgtgtcacaaagtcggatgaca
ctaggaaattttcttatacagttcattaggtctgccattttcgagcaggatgtatttgat
gctggcatgatcacatctctatgctgcaaatggatgatagaagttagcaatcatctttgt
ctgaaccaattagaggagcagaagttagtagagctgcttcttaacgatgatgaatcatgg
cctttgtgggtcactccagataaccgtaataatgagagaaagcatgcctttaaagtcgag
ggtgttttaactgatatacatatttcgcagagccaggtgtttgttgctctagttgacaag
cttatctcagaaatgggtattaacagaatggttgttggctctgatctacaagctttagct
gcagaggagagaggaggcaatgggctagtttcttctcagcatgaattttcccgagcttgg
gtagtcgctgaaatgctttgcaattggaagtggcctaatggcagtgctttagatactctt
ttgccttctttaagctctcatgctaaaagtgaaagtgatggtagcctaatttgcttattt
gactccactgtaaatattttgcttgagggtgctcttgtatgcggaacaaaaagtcagttg
agttttttcaatacatggccaccttcaagtaaagatctcgatgatattgaagagcctttt
ttgagagccctggtgactttactttttacactattgaatgaaggcatatggaaccaagaa
aaagctgttgggctctgggaattgcttctaaacaagctttatgtaggtcaagaagcaaat
atgaactgtttgaggattcttccacccctggtttctgttcttgcgcgcttcttgttccat
aataaaggatccagtgatttggttaaagattccttgcccgattcttttagagaaactatt
gttcaagactggctcgaaaagactctgacattcccgtccctgatttcatggacatctggt
gaagagatggaggaatggttccagttggttctgtcatgctatcctttaagcacaacagct
gatgtaggtcatttaaaactggatgcgagttccttggagcaaaaaattttacttgatgtg
tttcgtaagcaaaggcatgatgctaactcattatttgtcactaatgagctgccagtcgta
tcattactgctttcacgcttgatggttattgcagtagggtactgttgggaggaatttgat
gaagaagattggaaatttgtattatctaacttgaggcactggatagagttggtagttaca
acaatggaggaggctattgagtgcttggatcttgaaactggaaataaatctgatgataac
ttagatcttgtgataagcaagcttaagaagatcatacagaatttggatacatctcttatg
aatattgcaaccaatgccctttatgcattttcattagtcatggagcttgttggatgtaat
gctttggaaaaagctgaaaagttaacagtcttaaaaactgaagtatgccatcaaactatt
gatctggtccaggagggtgttttgcggatatttttttcaattggtattgcagaagctatt
tcaagtttgctttcatgccggagtttgtctataatagcaaggagccatcatatttatcct
cacttttggaatttagtatcttcgattgcattgaagtcctccacacattctagagaacaa
gcttttaaggcagttgagctttggggtctaagaacaggtgctgttagttctttgatggcc
atcctgttctcccccaaaccagtatctgtcttgcagcttacttcttttgttctcctttca
agtcagccattctctagtttggccttggtggacgatcatatttcagactcatcaagttct
actgttgatgtcgaatcccgtgatcttgatttgtcttccgagaataattttactctgagg
gaggggctacattgcctgatacacaaactaccacttgatgtactaggtatggatttggaa
gcacaagaaagggtgcatgttttccttgcttggtgtctaattttgagctatctagtgtct
ttaccatcttcttcctccaatagggagaaattggttcaacagatagaggagtctgcttct
tcagcaatattggactgtcttttccaacatattcctgttgaattatgtacagcacatagc
ttaaagaagagagacttagaaaccccacccgagcttgtgaatattgcaacttcggcaaca
cgtgctataagtacggggtctattctctttgcagtagaatcactttggcctattggacca
gaaaaaatggcatcacttgctgctgcaatatttggtttaatgcttcgtgttctccctgct
tacgttcgggtttggttcaatgatttacgtgatcgttattcgtcatctgcaattgagtct
ttcacaaaaacatggtgcagcccacatttgatggtagatgaattatctcagataaagaaa
tctgatttcgtagacgaatgttttgctgttagtgtaagcaaatcagccaatgaagtcatt
gctacctataccaaggatgagaccagtatggatttggtcatccgtcttcctgcttcctac
ccattaaggtctgtggatgtggagtgtacaaggagtcttggcataagtgaagtaaagcaa
agaaaatggctgttatccatgatggcatttgttcgtaatcagaatggtgctttagctgag
gctatacggatatggaagagcaactttgacaaggaatttgaaggagttgaagagtgcccc
atctgttacagtgtgattcatactaccaaccacagtcttccgcgtcttgcttgcaagact
tgcaagcacaaattccatgctgcatgcctctataaatggttttcaacctcccacaagtca
acatgcccgctgtgtcagtctcccttctga
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integrated database retrieval system
