Chenopodium quinoa (quinoa): 110723102
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Entry
110723102 CDS
T05764
Name
(RefSeq) RNA polymerase sigma factor sigA-like isoform X1
KO
K03086
RNA polymerase primary sigma factor
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110723102
Transcription machinery [BR:
cqi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110723102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
DUF4423
Motif
Other DBs
NCBI-GeneID:
110723102
NCBI-ProteinID:
XP_021758089
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MFRLKMATAAVVGLSAGKGLLSSSFYYSDLTERLSYTTGEPHQISSSKNVIVAKANFNHR
GSSVKALKECVDGATIPPITEPWISRSSPVEEETLDPETPLEALLLLQKSMLEKQLELSF
ERTGMNDVLRENNSKESRVTSSGTPARVRRINARKRSQGKKISTKESKKEKPLVTTVSPE
LLQNRSIGYVRGMTNDVLLTHSQVVNLSRKIEAGRSLEEHKARLKEKLGCEPSDEQLANS
LRMNRAEVRSKLIECSLAREKLAMSNVRLVMSIAQKYENMGADMADLVQGGLIGLLRGIE
KFDPSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKNKLEEKGIEP
SIDRIAESLNLTHKKVQNATEAVRSVLSLDREAFPSLNGLPGETYHSYIADNRLENNPWH
GVDEWTLKQDVSNLIDTTLRQREKAIIRLYYGLDEKSLTWEEISKRIGLSRERVRQVGLV
ALEKLKLAARKRRMDALLVKHYKLKFFVRGGLHLNTSYSQDNLSTVSEIQQDCCIMYSCM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggcttaagatggccacggctgctgtcgttgggcttagtgctggcaaagggctt
ttgagctcctctttctattattctgatctcaccgaaaggctctcttatactactggggaa
ccgcatcagatttcttcctcaaagaatgtgattgttgcaaaagctaattttaatcaccga
ggatcatcagtcaaggctcttaaagaatgtgtagatggtgctacaattcctccaattacc
gaaccatggatttcaagatcttctcctgtagaagaggagactttggatcctgaaactcca
ctggaagctctccttttgcttcaaaagtctatgcttgaaaagcagttggagttatccttt
gaacgcactggtatgaatgatgtgcttagggagaataattctaaggaatcacgtgtcaca
tcatcaggaaccccagctcgagtacgaaggataaatgctaggaagagaagtcagggaaag
aagatatccacaaaagaaagcaagaaagagaagcctctagtgactactgtaagccctgag
cttctccaaaatcgttcgatagggtatgtgagaggtatgacaaatgatgtattgctgact
cattcccaagttgtgaatttatctcgaaagattgaagctggtcgatccttggaggagcat
aaagcaagattgaaagagaaactagggtgtgaaccttctgatgagcaacttgcgaattcc
ttaaggatgaaccgtgctgaagtaagatccaaactaattgagtgttcgctggccagagaa
aaattggctatgagcaatgtacgcttggtcatgtcaattgctcaaaagtatgagaacatg
ggtgctgacatggctgaccttgtacagggtggattgattggactactccgtggaattgag
aagtttgatccctccaaagggttcaaaatttcaacatatgtttactggtggatacgtcaa
ggtgtttccagagcactggtggaaaattcaagaactttgaggttacctactcatctccat
gaaagactaagcttaattcgcagtgcaaaaaataaacttgaagagaaagggatagaacca
tcaattgatagaattgccgaatctttaaacttaactcataaaaaagttcagaatgctaca
gaggctgtcagatctgtcttgtcactggacagggaagccttcccttctttgaatggactc
ccaggagagacttatcatagttatattgcggataatcgtctcgagaataacccgtggcac
ggtgtagatgaatggacactcaagcaagacgtaagcaatcttatagacaccacactcagg
caacgagagaaagctataatacgtctttattatggcctggatgaaaaatctctgacttgg
gaagaaattagcaaaaggattggtttgtcaagagaaagagtccggcaggttggattagtc
gcgttggagaaactaaaacttgctgcaagaaagagaaggatggatgccttgttggtgaaa
cactataagttgaagtttttcgtcaggggaggcctacacttgaacacttcctattctcaa
gacaatttatccactgtttctgagattcaacaagattgttgtataatgtatagttgtatg
taa
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