Chenopodium quinoa (quinoa): 110723214
Help
Entry
110723214 CDS
T05764
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH-like isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cqi04121
]
110723214
Enzymes [BR:
cqi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110723214
Ubiquitin system [BR:
cqi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110723214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
PHD
PHD_5
TPR_MalT
YwpF
YlqD
Motif
Other DBs
NCBI-GeneID:
110723214
NCBI-ProteinID:
XP_021758247
LinkDB
All DBs
Position
Unknown
AA seq
1652 aa
AA seq
DB search
MGRIKKKPRRSVRFFENGSTSNYGENTANPGASLANDLKVDDFGNIQNPPLFFDVDKSSW
DSLEHRDLSEIVLHNLNYSPEFIGFELNEEICLRVRLCDVNERVVRIKSGYWPVFSSENI
YLEFISRRVVNNIEACDVVVCGQFDGSDDGITGLVQLVSMKFLTLRPVFGVRLCEDVCSL
RIRVEILQDAFSACTSLLDNTRLAWKKSMMSVMAWLRPELTTSEARYGVHVSSEIEEDLN
SEVDDGSFKDSNFDVGGFYEAIKRSKDCPMLDAELPDLLPELRPYQRRAACWMVQRERGA
LQDSVAWENNFYCPPMCVVVDFLESPSKMFYNPFSGNVSLCQEIAPSYVFGGILADEMGM
GKTVELLACILAHRKSSSEQGYCFRGITDITEKEKTRINRLKRERVECVCGALSESYKYE
GLWVQCDVCDAWQHADCVGYSPSEGIQRTKETSKGKRNSNRRKKNVADIVIMNNEYVCQI
CLQLMQATSSPIESAATLIICPSSILPQWHAEILRHTNPGSMRTYVYEGVKEKSSSNSTA
LDINELVSADIVLTTYDVLRDDLSHDSERHEGDRRLMRYGKRYPVIPTLLTRVLWWRICL
DEAQMVESSVVAAAEMALRLHARHRWCITGTPIQRKLDDLYGLLKFLKASPFDVSRWWAE
VIREPYERKNVAAMAFTHQIFRQLMWRSSKAHVADELELPPQEEQVSWLSFSAVEEHFYQ
RQHETCVDFAREVLERFKSQSLSKHCSASSSSVPDPFVTHLEATKLLNSLLKLRQACCHP
QVGGSGLRSLQLSPMTMDEILSVLISKTKLEGEDALRKVVSSLNGLAGIAIIQGELSNAA
SFYKEALNLAEEHSEDFRVDPLLNIHIHQNLAEVLKSASNTLQLVSFCGGQLTGKIEEMP
SQISVGITACLEHIKKTQNVTEDILDRPRDTSVLNCNSSKNGSEGVKKSSIESLIIICEG
LKQKYLSGFYSRLSQAQQEFQKSYMQVDDSINNRENKNRVWWLEALQQIEQNRDSANELS
RRIENAILDSQNITKSARIDSRFRSIDALKYSIQSGLDSLEAARKRLLDQLLEIDQTMEK
PRDEDVDRVRYCPNCYMNVDGPLCAHCELEELFQAYEARLFIRKEDNGGFISSAEAVDLK
KKRLERNHFYWNLEQKSNIDASSGPNNLGRSKRDSAKMFMDSKLPSELEIILGFIRTYFR
AHFGREGIAAASRHLVLLEEMKKEYAHARSLATAQAQVLRAYDEIKMATSRLRLKESGDD
DNSIDALSLEELEVANVENSSEKFVSLATLSRIRGKLRFLQGLVVSKQKEESDNEVAALT
DTPSPESAKSTRLVEEMCPVCQEILQNQKMVFQCGHLTCCKCFCTITERKMVSYSKMDDN
WVLCPTCRQPSDFESIALADDGQSKSSVVKSENLVASVSVQGSYSTKIEAITRKILWIKS
SDPVAKVLVFSSWNDVLDVLEHAFASNEISYVRMKGGRKQSQAALSIFKGEKMTEKGCVE
INDQRKPDSKFIQVLLLLIQQGANGLNLLEAQHVILVEPLLNPAVEAQAISRVHRIGQTR
KTIVHRFLIKDTVEESIYKLNKSRNSSSFISGNKKNQDQPVLTLKDVESLFAVTPPAAPD
KSNEHSSSSLMHLPPSVAAAIAAEKRLGQSTM
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggataaaaaagaaaccccggcgttctgtgagattttttgagaatggaagcaca
agcaattatggtgaaaatacagcaaacccaggtgctagtttagctaatgatctcaaagtt
gatgattttggtaatattcaaaacccccctttattttttgatgttgataaaagtagttgg
gattctttagaacacagagatttatctgaaattgtactccataatttgaattatagtcct
gaatttattgggtttgaattgaatgaggaaatttgcttaagggttaggttatgtgatgtg
aatgagcgtgttgttagaataaaatcagggtattggcctgtgttttcgtctgaaaacata
tatttggagtttattagtaggagggtagttaacaatatcgaagcttgtgatgtggttgta
tgtgggcagtttgatggtagtgatgacggaattaccgggttggttcaattagttagtatg
aagttcttgacattgaggccggttttcggggttaggttatgtgaggatgtatgttcactt
aggattagggtggagatacttcaagatgcatttagtgcttgtacatcacttctagataac
actaggctagcatggaagaagagcatgatgagtgtaatggcttggcttcggcccgagttg
acaacttctgaggctcggtatggggttcatgtatcgagtgaaattgaagaagatttgaat
tcggaggtggatgatggaagcttcaaagattcaaattttgatgttggtggattttatgaa
gccattaaacgatcaaaagattgtcccatgctggatgctgagttgcctgatttactccct
gagcttagaccatatcaacgtcgggctgcttgttggatggtacaaagggagaggggtgct
ttgcaggattcggttgcatgggaaaataatttttattgtcctcctatgtgtgtggttgtg
gattttttggagtctccgtcgaaaatgttctacaacccatttagtgggaacgtttctttg
tgtcaagagatcgccccttcatatgtctttggcggtattcttgctgatgagatgggcatg
ggaaaaactgttgagcttcttgcatgtatattagctcatcgcaagtcatcatctgaacaa
ggctattgttttagaggtataacagatattactgagaaggagaaaaccagaattaataga
ctgaaaagagagcgtgttgaatgtgtatgtggtgcacttagtgaaagttacaagtatgaa
ggattgtgggttcaatgtgatgtctgtgatgcatggcagcatgcagactgtgttggttat
tcaccctcagaaggaatacaaagaaccaaggaaacctctaagggaaaacgcaacagtaac
agaaggaagaagaatgttgctgatatcgtcataatgaataatgagtatgtgtgccaaatt
tgcttgcagttgatgcaagctactagctctccgatcgagtctgcagcaacccttattatt
tgtccttcttccatactgcctcagtggcatgctgaaatacttcgtcatacaaatccaggc
tccatgagaacttatgtctacgaaggtgtgaaagaaaagtcatcatcaaattccactgca
ttggatatcaatgaattagtctcagctgatattgtgctgacgacgtatgatgttctgaga
gatgatctatcacatgattcagagaggcatgaaggggatcgtcgcttaatgagatatgga
aaaaggtatcctgtgattccaacccttctgaccagggtgttatggtggagaatttgctta
gatgaagctcaaatggtcgagagtagtgttgttgctgcagcagagatggcattgcgtcta
catgcaagacatcgctggtgtattactggaacacctatccaaaggaaactagatgattta
tatggtcttctcaaattcctaaaagcaagtccatttgatgtgtctaggtggtgggctgaa
gttatacgagaaccatatgagcgaaagaatgtagcagctatggcattcacacatcaaata
ttcagacagttaatgtggcgctcctcaaaggcacacgttgcagatgagcttgagcttcct
ccgcaggaagaacaggtctcctggctttcgttctctgcagttgaagagcacttctaccag
cggcaacatgaaacttgtgtggattttgctcgtgaagttcttgaaaggttcaaaagtcag
agtttgtctaaacattgctcagcttcctcgtcgtctgtacctgatccctttgttacccat
ttggaggccacaaagctgctaaactcacttctgaagcttcgtcaagcttgctgccaccct
caagtgggaggatctggactacgttctcttcaactatctcccatgaccatggatgaaata
ttatctgtacttattagtaaaactaagttagagggagaggatgcattaaggaaagtagtt
tcttcattgaatgggcttgctggtatagcgatcatccaaggcgaactatctaatgcagct
tctttttacaaagaagcattaaatttagcggaagaacattctgaagatttccgcgtggac
cctttgttaaatatccacatacatcaaaatctcgctgaggttctcaaatcagcttcaaac
accttgcaactagtatcattttgtggggggcagctaactggaaaaattgaagagatgcct
tctcaaattagtgttggcatcactgcttgtcttgaacatataaagaagactcaaaatgtt
actgaagacattttggataggcctagggatacttctgtattgaactgcaattcatcaaaa
aatggctcagaaggtgttaaaaaatctagtattgaaagcttgattatcatatgtgagggt
ctaaaacagaaatatttatctggattttactcaagattgtcacaagctcaacaagagttc
cagaagtcatatatgcaggttgatgactctataaacaacagagaaaacaagaatagagtc
tggtggttggaagccctccaacaaattgaacaaaacagagattcagctaatgagttgtca
aggaggattgaaaatgctattttagacagccagaacattacaaaatcagcaagaattgac
tcccgtttccggagtatagatgcacttaaatactctattcaaagtggcttagactcactg
gaagctgctcggaaaaggttattagaccaactgttggaaattgatcagacgatggaaaaa
ccaagagatgaagatgttgaccgtgtacggtactgtccaaattgttatatgaatgtggat
ggtcctttgtgtgctcattgtgaattggaagagttattccaggcttatgaggctaggctc
tttattcgaaaagaggacaatggaggattcatctcgtctgctgaagcagtagatctaaag
aagaaaagattggagaggaaccatttttattggaatttggagcaaaagtcaaacattgat
gcatcatcaggtccaaataatctaggcagaagtaaaagggattctgcaaaaatgtttatg
gattcaaaacttccctctgaattggaaataatccttggttttataaggacttatttcagg
gcacactttgggagagaaggtatagcagcggccagcagacacctggtacttcttgaggaa
atgaagaaggaatatgctcatgcaagatcgttggctactgctcaagctcaggttcttcgt
gcatatgatgaaattaagatggcaacttcaagattacgcttaaaagaaagcggtgatgat
gataactctatagatgctctaagcctggaagaacttgaagttgctaacgtggagaattcg
agtgaaaaatttgtttcattggcaacattatcacgtatacggggaaaacttcggtttttg
cagggactagtagtttctaaacagaaagaagaatcagataatgaggtagctgctttaaca
gatactccttccccagagagtgcaaagagtaccagattggttgaggaaatgtgtcctgta
tgtcaggaaattctgcaaaatcaaaaaatggtgtttcagtgtggacatctaacgtgctgt
aaatgtttctgtacaataactgagcgaaagatggtttcctacagcaagatggatgataat
tgggtgctttgccctacttgtcgacaaccttcagattttgagagtattgccttggctgat
gatggccagagtaaatcatctgttgtgaaaagtgaaaatctggtggcttctgtatctgtc
cagggatcatacagtacaaagattgaagcaattacaaggaaaatcctgtggatcaagtca
agcgatccagtggctaaagttcttgttttctccagttggaatgacgtccttgatgtgttg
gagcatgcttttgcttctaatgagattagttatgttcgtatgaaagggggaagaaaacaa
tcacaagctgcattaagcattttcaaaggagaaaagatgacagaaaagggttgtgtcgag
atcaatgatcaacggaagccagattctaagtttatccaagtgttactcctcttaattcag
cagggagcaaatgggcttaacctcctagaagcacagcatgtcattcttgttgagccccta
cttaatccagcagttgaagcgcaagcaatcagcagagtgcaccgcattgggcagactagg
aaaaccattgttcatcgatttctaattaaggatacagttgaagaaagcatttacaaattg
aacaaaagcagaaattccagttcttttattagtgggaataagaagaatcaagatcagcct
gttttaacattgaaagatgtcgagtccttgtttgcagtaacacctcccgcagcaccggat
aaaagtaacgagcatagtagtagtagtctaatgcacttaccaccttctgttgctgctgcc
atcgctgctgagaaaaggcttggccaatctacaatgtga
DBGET
integrated database retrieval system
