Chenopodium quinoa (quinoa): 110724213
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Entry
110724213 CDS
T05764
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110724213
03015 mRNA surveillance pathway
110724213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110724213
03041 Spliceosome [BR:
cqi03041
]
110724213
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110724213
Spliceosome [BR:
cqi03041
]
Complex C
Other components
EJC/TREX
110724213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
110724213
NCBI-ProteinID:
XP_021759316
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MENQSGEKTEDELRKELEALQRQQREITERIRDPRGLRRGGFSGNAQRNNLPNQRPFTRP
GERFNSKDEPPPKRRLSSAVVKVEDGEVVEEEIAVRYMQSEDPVPGVSGPMAKNDQRSSV
SQQNRPFSGKIGNQQVDNGLDHQVKEVPRVLPKDEDPRLVNRNRRMLGQLLGTLEKFKKE
DMKLSGTEAYMRRSDSLQRAEQKAREESERLRQQEREKIAENRKRDLVLRARVAAKTEEK
KMELLFLQWSEHHKKLTNYLRTKAEPPIYYMPAKPIDENSALNDEKKEQAFLEWKVARRE
ELSAYQKEVHDQYIANVERDLERWLTARKSRNANNDANLQETMDKELETHRLEHGPKARK
IPDANNEDEEEVEDINVGEDDMMDDILDLDETERVDEQNKRDEDDGNPSLSVVE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccagagtggtgagaagactgaggatgaactccgcaaagaacttgaagctctt
caacgacaacaacgcgagattactgagcgtattagagatccaagaggacttcgtcgtggc
ggattctcaggcaatgctcaaaggaacaatcttcctaatcaacgtcctttcactcgacct
ggtgaaaggtttaattcaaaggacgagcctcctccgaagcggcgattgagttctgcagtt
gttaaggtggaagatggagaggttgttgaagaagaaatcgcagtccgttacatgcaaagt
gaggatcctgttcctggtgtttctggtccaatggcaaagaatgatcaaaggtcttcagtt
tcacagcaaaatcgtccattttctggaaaaatcggcaatcaacaagtggataatgggctt
gatcatcaagttaaggaggttccaagagtgttgccaaaagatgaggatccaaggttggtt
aataggaatcgaaggatgctaggtcaacttttggggaccctggagaaatttaagaaggaa
gacatgaagctttcagggaccgaggcatacatgcgaagatcagattccttgcaaagagcg
gagcaaaaggcacgcgaagaaagtgaaaggctgcgacaacaggagcgtgaaaaaattgct
gaaaataggaagcgtgatttggtactcagggctcgtgtagctgccaagactgaagagaag
aagatggaattgctatttcttcaatggagcgagcaccataagaagcttacaaattattta
aggacaaaagcggagccccccatttattacatgccagccaagcctattgacgaaaattca
gcattaaatgatgaaaagaaagaacaggcatttctggaatggaaggttgccaggagagag
gagctttctgcatatcagaaagaagttcatgatcagtatattgcaaacgttgaaagggat
ctcgaaaggtggttgactgctagaaaatcaagaaatgcaaacaatgatgcaaacttgcag
gaaaccatggacaaagagttggaaacacataggctggaacatgggcctaaggcacggaaa
ataccagatgccaataatgaagatgaagaggaggttgaagatataaacgttggcgaggat
gatatgatggatgatatccttgaccttgatgagactgagagagttgatgaacagaacaag
cgtgatgaggacgatggtaatccttctttaagcgttgtggagtag
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