Chenopodium quinoa (quinoa): 110724533
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Entry
110724533 CDS
T05764
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110724533
Enzymes [BR:
cqi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110724533
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
SpaA
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
110724533
NCBI-ProteinID:
XP_021759643
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All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MSFKAVQLTVQDHYIVIDNGILKITISKPDGIITKIKYNGIENLLEDTVVEEHRGYTLYW
DLNWSDLGTPGTRGYGERIKGTDFQVVVEKDEMVEVSFTRTWNPSSKAKFVPLSIDRRVI
MLQGSSGFYCYGIYEKLKGWPGFNLPQTRIVFKLNKKWFQYMAVADNRQRKMPLPDDRSP
GRCQILEPPEAVLLTNPIEEEYKGEVDDKYQYSCEDRDLQVHGWICTDPPTGVWQITPSD
EFRTGGPFKINLASHVGPYNLAMFISAHYAGEDMVAKFAQDEAWKRVFGPVFTYVNCGSK
EDDWHWLWDDAKEQAAIEADSWPYTFPASEDYPTSEQRGSLSGRLLVHDRYFDDDHIPAN
GAYIGLASPNESKSWQLESKGYQFWTTTDEDGYFFIDNIRAGDYNLYASVPGFIGDYVYD
NNVSVTPGCDIDMGELVYKPPSDGPTLWEIGVPDRTAREFYIPDPNPKYVNKLYLNHPDR
FRQYGLWERYTELYPDENLVYTIGESDYEKDWFFAQVTRKNGNTYQGTTWKIKFNLEEVD
QHGVYKLRLALATANLAELQVRVNDPKAKPPVFTTGLIGKENAIARHGIHGLYRLYTADI
QGNKLVQGDNIIYLTQANGGSPFIGIMYDYIRLEGPPDSDQS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaaggcagtccaacttactgtccaagatcattatattgttattgataatgga
atactcaaaatcacaatatcgaaaccagatgggatcatcacaaagataaagtacaatggt
atagagaatttgcttgaagacacagttgtagaagaacatagagggtatactttgtattgg
gaccttaattggagtgatcttggaactccaggcacaagaggctacggcgaaagaatcaaa
ggaaccgattttcaagttgtagtagagaaggatgaaatggtggaagtgtctttcacaaga
acatggaacccttcatctaaagccaaatttgtgccgttgagcattgatagaagggtcata
atgcttcaaggttcatcagggttctactgttatggtatctatgagaaattaaagggatgg
cctggattcaatcttcctcaaacaaggattgttttcaagcttaataaaaagtggtttcag
tatatggcagtagcagacaacagacaaagaaaaatgccacttccagatgacaggtcacca
ggaaggtgccaaatccttgaacctcctgaagcagtgcttcttacaaacccaattgaagaa
gaatataaaggagaggtggatgacaaataccagtattcatgtgaggacagagatctccaa
gtccatggatggatatgcaccgatccccctaccggagtttggcaaataacgcccagtgac
gagttcagaaccggtgggcccttcaagataaatctagcctctcatgttggcccttacaac
cttgcaatgttcataagtgcacattatgctggggaagacatggtagcaaaatttgcacaa
gatgaggcatggaaaagggtatttggtccggtttttacgtatgttaactgcgggtctaaa
gaagatgactggcattggttatgggatgatgctaaagaacaggccgcgattgaagctgat
agttggccgtacacatttccagcttctgaagactatccaacatctgaacaaaggggtagc
ctctctggtagattattagtccatgacaggtattttgatgatgatcatattccagccaat
ggagcatatataggtttagcttctcctaatgaatcaaaatcttggcaactggaaagcaag
ggttaccagttttggacaacaacagatgaagatggctatttcttcatagataatataaga
gctggtgactacaatctgtacgcttcggtccctggcttcataggagactatgtatacgac
aacaatgtttctgtaactccaggttgtgatattgatatgggggaacttgtgtataaacct
ccaagtgatggacctacactgtgggaaatcggtgttcctgatcgaacagctagggaattt
tacatacctgatccaaatcctaagtatgtcaacaaactctatctcaatcaccctgacaga
tttagacagtatggtttatgggaaagatacaccgaattatatcctgatgaaaatctagtt
tacacaattggtgaaagtgattacgaaaaggattggttctttgctcaagttaccaggaag
aatgggaatacataccaaggcactacatggaaaatcaagttcaaccttgaagaagttgat
caacatggagtctataaactaagattggcacttgcaactgcaaatttggcagaattacag
gttcgagtaaatgatccaaaagcaaaacctccggtgtttacaacaggactaatagggaaa
gaaaacgcgattgcaagacatgggattcatgggctatataggctttatactgcagatata
caaggaaataagcttgtacaaggtgacaatataatctatttgactcaggcaaatggtggt
agcccttttataggaatcatgtatgactacattcgcctcgaagggcctcctgattctgat
caaagttaa
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