KEGG   Chenopodium quinoa (quinoa): 110724571
Entry
110724571         CDS       T05764                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03082  ATP-dependent chromatin remodeling
cqi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110724571
   03083 Polycomb repressive complex
    110724571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cqi03036]
    110724571
Enzymes [BR:cqi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110724571
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     110724571
   HDAC complexes
    Sin3A-HDAC complex
     110724571
    BRAF-HDAC complex
     110724571
    REST complex
     110724571
    SHIP complex
     110724571
    MiDAC complex
     110724571
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110724571
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110724571
  Chromatin remodeling factors
   NuRD complex
    110724571
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110724571
NCBI-ProteinID: XP_021759674
UniProt: A0A803LJY7
LinkDB
Position
Unknown
AA seq 501 aa
MDSGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPVPARDRDLCRFHADDYVTFLRCITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYQSLFRPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFN
VPLLLVGGGGYTIRNVARCWCYETGVALGIELDDKMPQHEYFEYFGPDYTLHVAPSNMEN
KNSRPMLDEIRAKLLEYLSTLQHAPSVPFQECPPDTELHEEDEDQQDPDRRWDPDSDMEV
DDDRPLSIRSRVKREIMEPDHKDSEDVKEPVDHARDMAVSYNTGNTSLKAPNLGSDQPEA
CVKMDQDSSNKPSDQPTDMNL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggactcaggaggtaattcgcttccgtctggaccagacggagtgaaacgtaaagtttcg
tatttctatgacccggaagttgggaattattactacgggcaaggtcaccctatgaagccg
catagaattcgtatgacacatgctcttttagctcattatggtctgcttcaacatatgcaa
gtgctcaagcctgtacctgcaagagatagagatctttgtagattccacgccgatgattat
gtgaccttccttaggtgcattacccctgaaacgcaacaggatcaattgaggcagttgaag
agatttaatgttggtgaagattgtcctgtatttgatggtctgtactcgttttgtcagact
tatgctggcggttcagttggtggtgcggtcaaattgaaccatgggctttgtgacattgcg
attaattgggcaggtggcttgcaccatgcgaaaaagtgcgaggcttctgggttctgttat
gtgaatgatattgttttggcaattttggaacttctcaaagtgcatgagcgtgtattgtat
gtggacattgatattcaccacggagatggtgtagaagaagctttttatactacagatagg
gtcatgacagtgtcttttcacaaatttggagattattttcctgggacaggagatattcgt
gatattggatatggaaaggggaagtattattctctcaatgtgcccttagatgatggtatt
gatgatgagagctaccaatcattgtttaggcccattatgggaaaagtaatggaggttttt
aaacctggggctgttgtcctgcaatgtggtgctgattctttgtccggtgacagattgggc
tgttttaacctctccatcagaggccatgcagagtgcgtcaaatacatgagatccttcaat
gtcccgctactgctggtgggtggaggtggctatactataagaaatgtagctcgttgttgg
tgttatgagactggtgttgcccttgggattgaacttgatgataagatgccacaacacgag
tactttgagtattttggtccagactatactctccatgttgctccaagtaatatggaaaac
aagaactcacgccctatgttggatgaaattagagccaagcttcttgaatacctctcaacc
ctacagcatgcaccaagcgttccattccaggagtgtcctcctgatactgagctccatgag
gaagatgaagatcaacaagatccagatcgaagatgggatccagattctgatatggaggtt
gatgatgaccgccccttatcaatacgaagcagagtgaaaagagagattatggagcctgat
cataaagattcggaggatgtcaaagagcctgtggatcatgcaagagacatggccgtctct
tataatacaggaaatacatctttgaaggctccaaatttgggctcagatcaaccagaagcc
tgtgttaaaatggaccaggacagctcaaataagccctctgatcagccaactgatatgaat
ttatga

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