Chenopodium quinoa (quinoa): 110724600
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Entry
110724600 CDS
T05764
Name
(RefSeq) uncharacterized protein LOC110724600
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110724600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110724600
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110724600
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110724600
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110724600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
110724600
NCBI-ProteinID:
XP_021759703
UniProt:
A0A803LK11
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MRPFVHHASNQLTSSAPGTSAPQQVVGNTSNLLPNLMQMQSQMGFVNNNANYNPNLGNGN
AQIPLGFMNVPNFNGHMGNSAQQIQSNSGFSPNSFGQNLNVFGFPGNGQLSNLGQGNLNQ
LFGNNGQFGWQNQLQSMNQLGNMPMLNPSQVNALTQLLGCANQVAQAMNSQNAGFLGNPN
PQLGFGHPNGGLQQAGFSQQLPVAPPQLQNVSVPPSNPAVSSHPHGQSPNFQGNHGQKQG
RHGMHIPNSNPHQNKSFVNPNREASNWRNQKSQDRQMPNPKGKLKFPKMNEGKGVKNVGS
DDSANRSQGGKRRSLSVFYTEKEIQQWREERKKNFPSKGNVEKKLAQKQANADAADEDAK
LRRQQLKDVLAKQVELGFEVPEIPSHYLLDPEHQAHGRDKSSRPLNKGRFQNNGRFQNRF
DKGRNYDSKDRFTTKRGTEDDGSFKKYDRFAKRQRLENDNAPKAHLSVKEPTLLQKLLST
DIKKDQSCLLQAFRFMVINSFFKDWPEKPLNFPKVIVKEIGVESNAIEDESSILEGELSN
DEDQDTCDGKDGENDVVDPQEEGEITD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccttttgttcaccatgcctctaaccagcttacttcttcagctcctggtacttct
gcacctcaacaggttgttggaaatacgagtaatttgttgcctaatttaatgcaaatgcaa
tcgcaaatgggttttgttaacaataatgctaactataacccgaatttgggtaatggtaat
gctcaaattccccttggttttatgaatgttcccaatttcaatggtcatatgggtaactca
gctcaacaaattcaatctaattctgggttttcaccaaatagttttgggcagaatttgaat
gttttcgggtttccgggaaatgggcaattgagcaatttgggtcaaggaaacctgaatcaa
ttgtttgggaataatgggcagtttgggtggcaaaatcaattacaaagtatgaatcaactt
gggaatatgccaatgttgaatccttctcaagttaatgcattgactcagttattaggttgt
gctaaccaagttgctcaggccatgaattcgcagaatgctggttttctcggtaaccctaat
ccacagcttggttttggccatcctaatggtggtttacagcaggcaggtttcagtcaacag
ctgcctgtagctcctccgcagctgcagaatgtttctgttccgccttcaaatcccgctgtt
tcatctcatccgcatggtcagtccccaaattttcagggtaatcatggtcaaaaacaagga
aggcatggaatgcatattccaaactcaaatcctcatcaaaataagagttttgtgaaccct
aatagagaagcatctaactggagaaatcaaaagtctcaagatcgccagatgcctaatcca
aaaggaaaacttaagtttcctaagatgaatgaaggaaaaggcgttaaaaatgttggttct
gatgattctgcaaaccgatctcaaggtggaaagagaaggtcactctctgtgttctacact
gagaaagaaattcagcaatggcgtgaagaacgcaagaaaaattttccttcaaaaggcaat
gtggaaaagaagctggcacaaaagcaagcaaatgctgatgctgcagatgaagatgctaag
ttacgacgtcaacaactaaaggatgtattggcaaagcaagttgagttgggttttgaagtt
ccagaaattccatcccactatctgttggatccggagcaccaggctcatggcagggataaa
tctagcaggccattgaacaagggccgcttccaaaataatgggcgattccagaatagattt
gataaagggcgaaattatgacagcaaagatcggtttactacaaagaggggcacagaagat
gatggttcattcaagaagtatgatcgatttgcaaaaaggcaaaggttggagaatgataat
gcaccaaaggctcatttgagtgtcaaggaacctacacttctgcaaaagcttttgagcact
gatataaagaaagatcagagctgtctactgcaggcttttcgttttatggtcatcaactct
ttcttcaaggactggcctgagaaacctcttaatttccctaaggttattgtcaaggaaatt
ggagtagagagcaatgcgattgaagatgagtcttccattctcgagggagagctcagcaat
gacgaggaccaagatacttgtgatgggaaagatggtgaaaatgatgttgttgaccctcaa
gaagagggagaaatcacagactag
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