KEGG   Chenopodium quinoa (quinoa): 110724723
Entry
110724723         CDS       T05764                                 
Name
(RefSeq) probable small nuclear ribonucleoprotein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110724723
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110724723
   03041 Spliceosome [BR:cqi03041]
    110724723
   03032 DNA replication proteins [BR:cqi03032]
    110724723
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     110724723
Spliceosome [BR:cqi03041]
 Complex A
  U1 snRNP components
   Sm proteins
    110724723
  U2 snRNP components
    110724723
 Complex B
  U1 snRNP components
    110724723
  U4/U6.U5 tri-snRNP components
    110724723
 Complex C
  U2 snRNP components
    110724723
DNA replication proteins [BR:cqi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     110724723
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 110724723
NCBI-ProteinID: XP_021759864
LinkDB
Position
Unknown
AA seq 88 aa
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL
GEILIRCNNVLYLRGVPEDEEIEDADRD
NT seq 267 nt   +upstreamnt  +downstreamnt
atggctactgtcccagttaacccaaaacctttcttgaacaatctgactggaaagcctgtc
attgtgaagctgaagtggggaatggagtacaaaggctatcttgtgtcagttgatgggtac
atgaacctacagctggcgaacacagaagagtatattgaaggccagaagactggagatctt
ggagagattctcatcagatgcaacaacgtactgtatctccgtggagttcctgaggacgag
gagatagaggatgctgacagagattga

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