KEGG   Chenopodium quinoa (quinoa): 110725044
Entry
110725044         CDS       T05764                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03020  RNA polymerase
cqi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110725044
  09124 Replication and repair
   03420 Nucleotide excision repair
    110725044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqi03021]
    110725044
   03400 DNA repair and recombination proteins [BR:cqi03400]
    110725044
Transcription machinery [BR:cqi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110725044
  RNA polymerase III system
   RNA polymerase III
     110725044
  RNA polymerase I system
   RNA polymerase I
     110725044
DNA repair and recombination proteins [BR:cqi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110725044
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 110725044
NCBI-ProteinID: XP_021760210
UniProt: A0A803M535
LinkDB
Position
Unknown
AA seq 199 aa
MSSSDDEITKLLKVRKTVMQMLNDRGYLVTDDEINMTKQQFIEYYGDNKSRDNLFMIKNK
QNDTSDQIMVIFLIPEPSKETIGIGPLKKCIERMQSEKIFRAILVTEHGLTAAAKKAVEL
PNIKLEVFQDSELLNNVTEHDLVPEHQVLTDGEKKAVLEKYKVKETQLPRMLVTDPVARH
YGFQRGQVVKIIRPSEYVS
NT seq 600 nt   +upstreamnt  +downstreamnt
atgtcttcatctgatgatgaaattacaaaactcctcaaagttcggaaaactgtaatgcaa
atgttgaatgatcgaggctatttagtaacagatgacgaaatcaacatgaccaagcaacag
tttattgagtattatggtgacaataagagccgagacaaccttttcatgattaagaataag
caaaatgatacttctgatcagattatggttatctttctgattccggagccatccaaggaa
accataggtataggcccactcaagaaatgcattgagaggatgcaatctgagaaaatattc
agggcaattttggtgactgaacatggtttgacagctgcagcaaagaaggctgttgaatta
ccaaatataaagttagaggtcttccaggattctgaactgttgaataatgttaccgagcac
gatcttgttccagagcatcaggtgcttacagatggggaaaagaaggcagtgcttgagaag
tataaagttaaggaaactcagctaccgagaatgctggtcactgaccctgttgcaagacat
tacggctttcaacgtgggcaagtcgtgaagatcatacgtcctagtgaatatgttagctga

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