Chenopodium quinoa (quinoa): 110725316
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Entry
110725316 CDS
T05764
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110725316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110725316
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110725316
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
110725316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110725316
NCBI-ProteinID:
XP_021760499
UniProt:
A0A803M594
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MSGLSLGEKNFIRGGIAQDLRCDGRKRLSYRPIHLDTGVISQANGSARVRIGGTDVIASV
KAELGRPNSSQPDKGKVSIHIDCSATAAPIFQGKGGEALSTELAADLQRCLLGGKSGAGA
GIDLSSLSIVEGKVCWDLYIDGLVVSSDGNMLDALGAAIKAALSDTGIPKVNVIAADSTS
AGDQPEVDISDEEFLQFDTSAVPVIVTLTKVGKHYIVDATEEEESQMSSAMSVSINRKGL
ICGLTKRGGAGVDPSIVLDMISVAKHVSENFINKLDSEIAAAEAREEE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtctggactatcgcttggagaaaagaacttcatacgaggtggtattgctcaagatctt
cgttgtgatggtcgaaaacgcttatcttacagacctattcatcttgatactggggtcatt
tcacaggcaaatggttcagcaagagtccgaattgggggaactgatgtcattgctagtgtc
aaggctgaattagggagacccaattcgtctcaacccgataaaggaaaggtttccatacat
attgattgtagtgctacagctgcacctatctttcagggcaaagggggtgaagcattatca
acagaacttgctgctgatcttcagcgttgcctcttgggtggtaaaagtggagcaggagct
ggaattgacctttcatccctatctatcgtggaagggaaggtttgttgggatctttatatt
gatggccttgtggttagttcagatgggaatatgttggatgccttaggtgctgcaatcaag
gctgctttaagtgataccggtattccaaaagttaatgtcattgctgctgattcgacatct
gctggtgatcaacctgaagttgatattagtgatgaagaatttttacagtttgatacttct
gcagtccctgtcatagtaacattaaccaaggtaggaaaacactacatagttgatgcaact
gaagaggaggaatctcaaatgagttccgcgatgtctgtctctatcaacaggaagggacta
atatgtggtcttaccaagcgtgggggtgcaggtgtagatccaagcatagtccttgatatg
atctcagtagcaaaacatgtgagcgagaattttataaacaaattagactccgagatagct
gctgcagaagctcgtgaggaagaatga
DBGET
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