Chenopodium quinoa (quinoa): 110725591
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Entry
110725591 CDS
T05764
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110725591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110725591
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110725591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_12
TPR_10
TPR_MalT
SRP_TPR_like
ARM_TT21
ARM_TT21_N
TPR_7
Motif
Other DBs
NCBI-GeneID:
110725591
NCBI-ProteinID:
XP_021760747
UniProt:
A0A803LH60
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MDSRDSTSSSSINVAREGSDDDGVLSATALLAKEAFALFQSDKFSECVDVLNQLLQKKEG
DPKILHNIAVAKFLRDGCSDPKKLVEVLVNVKRKSEDLARASREQTDAASQAANKAISGA
KGTNNLANSPSTVFTDEFDSSVAALNIATVLFHLHEYSKALSVLEPLFQNIEPIDETTAL
HVCLLLLDVAFVTQEASKFADVISYLEKAFGVSYMLNQADGGSTGQQPASNIVVKSSSIP
NNSSASDDFNPEGTAAGNTSEGSLSRTLSDETIEYETLLSTLDISGQNISRASHLSTSND
LLRTPADRSTPTINLRLQLPLYKIQLLLLTRNLKAAKREVKLAMNIARDIDSSRALLLKS
QLEYARGNNPKAFKLLRASNSQSDVGSSIIINNNIGCIYYQQGNQHTSSIFFHKALSNCS
SLWKEKPRKLATFSQDKSFLIAYNCGVQYLSCGKPVLAARFFLKACLVFYNRPLLWLRLA
ECCLMALDKGLLKRTETPRHESQVKVQVIGQGKWRHLAFENGSLRSGFTNPDDREDLSLE
KNSKPTLSLSFARQCLLNSLHLLGNSELKHIKSGSLTKSSAEESESTDVVTAKNLAHKNL
GSNDTKSKDTAGSGQMSTNGDAKEQRGGAHSNTAAANTLSEYEEICKRENHKLKQAILID
LAFVELELGNPLNALSTALTLLNIPECSRMNAFLGHVYAAEALCLLNRPKEAAEHLSTYL
ASGNVELPYSEDDCRQWQAKKTLDAEDSNTGQTAARGSVYEEQQDNVFLSPEEARGALYV
NLASMHVLQGELEQASRYAAQALATLPASQEAALMAVYLDLKLAKSREALIKLKRCCWVQ
FLPFSSRSKAAS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcgagattcaacttcgtcttcttcgattaatgtggctagagaaggttccgat
gacgacggtgttctttcggccactgctttgctcgctaaagaagcttttgccttgtttcaa
tctgataagttttcggaatgtgttgatgtgctcaatcaattgttgcagaaaaaggaaggt
gatccaaagattttgcataatattgcggtggcaaaatttttgcgtgatggatgttcagat
ccaaagaagttggttgaagtccttgtcaatgttaagaggaaaagtgaagatcttgcacgt
gcatcccgagagcaaacagatgctgcttcccaagctgctaataaagccatttctggagcc
aaaggaactaataatttggcgaacagccccagtacagttttcacagatgaatttgattca
tctgtggcagcgctaaacattgcaactgtcctattccaccttcacgagtattcaaaggca
ttgtcagttttggagccactgtttcagaatattgaacccatagatgagaccacagctctt
catgtttgcctcttgctgctggatgttgcttttgtgactcaagaggcatctaaatttgcg
gatgtaataagctatcttgaaaaggcctttggtgtaagctatatgctcaatcaagctgat
ggtggaagtacagggcagcaaccagcttcaaatattgtagtgaagtcctcatcaattccc
aataattcgtcagcctctgatgactttaatcctgaagggactgctgctggaaatacctca
gaaggttccttatcgagaacactatcagatgaaacgattgagtatgagaccttgctatca
acactcgatataagcgggcagaatatttccagggcatctcatctgtcaacttcaaatgat
ctgttaaggacaccagctgatcggtctacacccaccattaatttgaggttacagttgccc
ctatacaagatacagcttttgctcctcaccagaaatctgaaggcagctaagcgtgaagta
aagctggcaatgaacattgcacgtgacatagattcttctagggctctactactgaagtcg
cagcttgaatatgctcgtgggaacaaccctaaagctttcaaactcttgagagcatcaaat
agtcaatcagatgttggaagttcaattataatcaacaataacattgggtgcatctattat
caacaggggaatcaacacacatcaagcatatttttccacaaagccctgagcaattgttca
tcattgtggaaggaaaagcctcggaagctagccacattttctcaagacaaatcttttctc
atagcatataattgtggtgtgcaatacttgtcctgtggtaaacctgttctcgctgctcga
ttttttctgaaagcctgtttggttttctacaacaggcctctcctgtggctgcgacttgca
gaatgctgcctaatggcgctggataagggactcttaaagcgtactgagacccctagacat
gaatcacaggttaaggtccaagttattgggcaagggaaatggagacatcttgcctttgag
aatggttctttgagaagtggtttcactaatcccgatgacagggaggatttgagtcttgaa
aaaaatagcaagccaacgctatctctgtcatttgcccgacagtgtcttttaaactccctt
cacttgctaggcaattctgagttgaagcatatcaagtctgggtcattgacaaaatcttct
gcagaggaaagtgaatctactgatgtagtaacagcaaagaacttggctcacaagaacttg
ggaagcaatgatacgaagtctaaagacacagcaggttcaggtcaaatgagtacaaatgga
gatgcaaaagaacagagaggtggagctcattctaatacagccgcagcaaacaccctatct
gagtacgaggagatttgtaaaagagaaaatcataagctcaagcaagcaattcttattgat
ttggcatttgttgagcttgaattaggaaatccacttaatgcgctctctacagctctaact
ctcctgaatatacctgaatgttcccgaatgaatgcctttttggggcatgtttatgcagct
gaggccctttgcttgctgaacagaccgaaagaagctgctgaacatctctctacttattta
gctagtggaaatgtggaattgccttacagtgaagatgattgtagacagtggcaggcaaag
aaaactctggacgctgaagattcaaatactggacaaactgctgctaggggttctgtgtat
gaggagcaacaagataacgtgtttctctcaccagaggaagcccggggagcactctatgtg
aacttagcatccatgcatgtcttgcagggagaacttgagcaggctagtcggtatgcagct
caagcgttggcgactctgcctgctagccaagaagctgcactcatggcagtttatttggat
ctgaagcttgctaaatctcgagaagctctcatcaagttgaaacgttgttgttgggttcag
ttcttgcccttctcttcaagatcaaaagccgcttcttga
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