Chenopodium quinoa (quinoa): 110726111
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Entry
110726111 CDS
T05764
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110726111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110726111
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110726111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
DUF2465
Motif
Other DBs
NCBI-GeneID:
110726111
NCBI-ProteinID:
XP_021761264
UniProt:
A0A803MXM5
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MDDDLHFLDQNKLPELKLDAKQAQGFLSFFKTLPQDSRAVRFFDRRDYFTAHGENAAFVA
KTYYHTTTALRQLGNGSDSLSSVTVSKSMFETIARDLLLERTDRTIELYEGSGSNCRLVK
SGSPGNLGSFEDILFANNEMQDSPATVALLPNFRENGCTIGLGYIDLTKRVVGLAEFLDD
SQFTNVESALVGLGCRECLLPVDVAKSTEGRGLLDALSRCGVMVTERKKNEFKARDLVPD
LGRLVKGSIEPVRDLVSGLEIAPAALEALLSYAEMLSDETNYGNFTIKPYNLDSCMRLDS
AAMRALNVMESKNDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINDRLNLVQ
AFVEDIELCQELRQHLKRISDIDRLTRNLQKKKAGLHHVVKLYQSSIRLPYIKSALEKYE
GQFSPLIKERFFEPLGICSDDDHLNKFVALVETSVDLDQLENGEYMISSGYDSRLLELKE
EQESLESNIDSLHKKAADDLDLTDKVLKLEKGTQFGHVFRITKKEEPKIRKKLTTQFIVL
ETRKDGVKFTNSKLKKLGDQYQRILEEYKNCQKELVQRVVQTAATFSEVFESLAALLAEL
DVLLGFADLATSCPTPYTRPDITPSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGQS
WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRATISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVDVIKAPTLFAT
HFHELTALAHDNREGEPSNKKIIGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHV
AEFANFPESVVSLAREKAAELEDFSPATINAVDLSKQAGQKRKREFDPDAVSQGAARAHQ
FLKEFAELPLEQMDMKQALDHVNKMKSDLEKDSENCHWLKQFL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatttgcattttctcgatcaaaataaactccctgaacttaagctcgatgca
aagcaggctcaagggtttctatcatttttcaaaaccctacctcaggattctcgagctgtt
cggttttttgatcgtcgggattattttactgcccatggagaaaatgcagcttttgtcgca
aaaacttattaccacactaccactgcccttagacaattaggtaatggttctgatagctta
tccagcgtaactgtaagtaaaagcatgttcgaaacaattgctcgtgatttactcttagaa
aggacagaccgcacaattgagctttatgagggtagtggctctaactgtaggcttgtgaag
agtgggagtccaggaaacttaggaagttttgaagacattctatttgcaaataatgaaatg
caagattctcctgcaactgttgcattgttaccgaacttcagggaaaatggttgtactatt
ggattgggttacattgaccttaccaagagagtggttggtttggctgaatttcttgatgat
agccaattcacaaatgtggaatcagctctggtagggcttggttgcagagaatgccttctc
ccagtggatgttgcgaagtctactgaaggaagggggttgcttgatgcattatcaagatgt
ggtgtgatggtaactgaaaggaaaaaaaatgagttcaaggcaagggatttggtgccagat
cttggaaggcttgtaaaaggttcgattgagcctgttcgtgatctagtttcaggacttgaa
attgctcctgctgctttggaagccttattatcttatgcagaaatgctttcagatgaaacc
aattatggaaattttactattaagccgtataatcttgacagttgcatgaggttagactct
gctgctatgagagcattaaatgttatggagagcaaaaatgatgctaacaaaaattttagc
ttatttggtctgatgaatagaacctgtactgccggaatgggaaaacgattgcttcacatg
tggctgaaacagcctttattggatgttaatgaaataaatgatcggctgaacttggtacaa
gcttttgtggaggatatagaactttgtcaggagcttagacaacatctaaaaagaatatct
gatatagatagattaacacgcaatcttcagaagaaaaaagctggtttacatcatgttgta
aaactttatcagtcaagcataagacttccatacataaaaagtgctcttgagaaatatgaa
gggcaattctcccccctgatcaaggaaaggtttttcgagccccttggaatatgtagtgat
gatgatcacctaaacaagtttgtggcccttgttgagacttctgttgaccttgatcaactt
gagaatggtgaatatatgatctcatctggttatgattcaaggcttcttgaactgaaagag
gaacaagagtcacttgagagcaatatagatagtcttcataaaaaagctgctgatgatctt
gatctcactgataaagttctaaagctagaaaagggtacacaatttggacatgtatttagg
ataacaaagaaggaggaaccaaaaattagaaaaaagcttactacacagtttattgtacta
gaaacacgaaaggatggtgtcaaatttacaaattcaaaactcaaaaaattaggggatcag
tatcaaaggatacttgaagagtacaaaaattgccaaaaggaactagtacagcgagtggtt
cagactgccgctacattttctgaggtatttgagtctttagccgcattgctagctgaactc
gatgttttgcttggttttgctgacttggctacaagctgtcctactccctatactaggcca
gacataactccatcagatgttggagatattatattagaaggaagtagacacccctgtgtt
gaggcacaagattgggtgaatttcataccaaatgactgtaaacttgtcagaggacaaagc
tggttccaaatcatcactgggccgaatatgggtggaaagtccactttcattagacaggtt
ggtgtaaatattttaatggcacaagtgggatcatttgttccttgtgacagagccaccatt
tctgttcgtgattgcatatttgctcgtgttggtgctggcgattgtcaattgcgaggagtg
tccacttttatgcaagaaatgcttgagacagcatcaattttgaagggagccactgacaag
tccctgataattattgatgagctgggccgagggacatctacttatgatggatttggccta
gcttgggcaatttgtgagcacattgttgatgtcatcaaggcacctactttgtttgctacc
cacttccatgaactcacagcattagcacatgataacagagagggtgaaccttcaaataaa
aagattattggtgtagcaaattaccatgttagtgcacacatagattcttcaagtcgtaag
ctgaccatgctctacaaggttgaaccaggggcttgtgatcaaagttttggcattcatgtt
gctgaatttgccaattttcctgaatcggttgtatccctagcaagagaaaaggctgctgag
ctggaagacttctcccctgccacaataaatgctgttgatctttcgaaacaggcgggacaa
aaacggaaaagggaatttgatcccgatgctgtctctcagggtgcagcaagggctcaccag
tttttgaaagagtttgctgagcttccattagaacagatggatatgaagcaagcattggat
catgtcaacaaaatgaagagtgacttagagaaggattcagagaactgtcattggttgaag
cagtttctttag
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