Chenopodium quinoa (quinoa): 110726352
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Entry
110726352 CDS
T05764
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14-like isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110726352
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110726352
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
110726352
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_30
AAA_19
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
110726352
NCBI-ProteinID:
XP_021761514
LinkDB
All DBs
Position
Unknown
AA seq
2086 aa
AA seq
DB search
MVLQLPRLTNSLRDPFDIDRAYLHRKTLLQNLFPTSNANSVDESELARKIVFDWEEASSE
VRQAYKQFIGAVVDLIDGEVVSDEFREVALSVYRLFSDRGEEEEDSRRHAEKKSELQKLL
GHTVSEGSLQKVVQLAQRLCSLQPRTASPKLDGNLIDDDDVEFGSNLDFRPPSRFLLDIT
LDDEEILGPEDLAPSTSVYNDWPATDADNNRFSNGGIKYDLKWLRDSCDLIVRGSGSQLS
RDELAMTICRVLDSDKPGEEIAGDLLDLVGDSAFETVQELILHRKELVEAISHGLLVLRS
DKSPSNAQPRMPSYGTQVTVHTESEKQIDKLRRKEEKRHKRGVGQGIEDDFSSTSFSSLL
EASERKNLFDDVIGSGPGPQSLGVSALPQGTVRKHFKGYEEVIIPPIPTAPMKPGERLIE
IKELDEFAQAAFHGYKSLNRIQSRIFQTVYNTNENILVCAPTGAGKTNIAMISILHEIGQ
HFKDGYLHKNEFKIVYVAPMKALAAEVTATFSHRLAPLNMTVKELTGDMQLSKNELEGTQ
MIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQS
MIRIVGLSATLPNYLEVAQFLRVNPDSGLFFFDSTYRPVPLAQQYIGISEKNYMARTELL
NKICYYKVVDSLKQGHQAMVFVHSRKDTGKTAERLVELAREDNNLELFQNETHPQFHLIR
KEVMKSRNRELVGLFDSGLGIHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLPA
HTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRLL
TNQLPIESQFINSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGWDEI
VADPSLGLKQRSFITDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIHYSSVETYNE
MLKRHMSDSEVIDMVAHSSEFENIVVREEEQMELENLARECPLEIKGGPSSKHGKISILI
QLYISRGSIEAFSLISDAAYISASLARIMRALFEICLRRGWSEMSAFMLEYCKAVDRQIW
PHQHPLRQFDRDISLEILRKLEDRGADLDRLYDMEEKDIGALIRYVPGGKTVKQYLSFFP
MVLLSATVSPITRTVLKVDLLVTPDFIWKDRFHGTAQRWWILVEDSENDHIYHSELFTLS
KRTARADPQKLSFTVPIFEPHPPQYYIRAVSDSWLQSESFYTISLHNLALPESHTSHTEL
LDLKPLPITALGNRMYESLYSFSHFNPIQTQAFHVLYHTDSNVLLGAPTGSGKTISAELA
MFHLFNSQPDMKVIYIAPLKALVRERMKDWKRRLVTQLGKKMVEMTGDYTPDLMALLSAD
IIISTPEKWDGISRNWHTRSYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTER
SVRFVGLSTALANAGNLADWLGVGEVGLYNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMN
KPAYAAICSHSPTKPVLVFVSSRRQTRLTALDLIQYAASDEHPRKFLNISEDALQMILSQ
ITDQNLRHTLQFGIGLHHAGLNDKDRSVVEELFGNNKIQVLVSTSTLAWGVNLPAHLVII
KGTEFYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP
VESSLREHLHNHFNAEIVSGTICHKEDAIHYLTWTYLYRRLTVNPAYYGLEDINPVVVSS
YLSRLVQSTFEDLEDSGCIKMVEDRVEPMILGSIASQYYLSYLTVSMFGSNLGPGLSLEF
SLHILSAASEYDELPVRHNEENHNATLAERLPYKVDKNRLDDPHVKANLLFQAHFSQLEL
PVSDYVTDLKSVLDQSIRIIQAMIDVCANSGWLSSTLNCMHLMQMVMQGLWFDNGSALQM
LPCLNINVMVTLTRQGISNVKQLFDVPRATMQGLLGSFPASSLYEDLQRFPRIHVKLRLK
KKNERASSSSLNVRLENVNANRKTPRAFTPRFPKVKDESWWLVLGNTVSSELYALKRVSF
ADHLVTNIDFPSDLVTCQGLKLILVSDCYLGYDLEYSLEELLKDQP
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttcaactccctcgtctcaccaattctcttcgagaccctttcgacatcgatcgt
gcttatcttcatcgcaaaactctccttcaaaacctctttccaactagtaatgcgaattcg
gttgatgagtcggaattagcgcgaaagattgtttttgattgggaagaagcttcttctgaa
gtgcggcaagcgtacaaacagtttattggcgcggttgttgacttgattgatggagaagtt
gtgtcggacgagtttcgtgaagtggcattgagtgtttatcgactctttagtgaccgaggg
gaggaggaggaggatagtagaaggcacgccgagaagaagtctgaattacaaaaattactg
ggtcatactgtttctgaaggtagcttgcagaaagtagttcaattggctcagagactatgt
agtctgcaacctagaacagcttcaccaaagttggatggaaatttgattgatgatgatgat
gtagaattcggatctaatcttgattttagacctccttcacggtttttgctggatattact
ttggatgatgaggaaattttggggccagaggacttggctccatcaacttcagtgtacaac
gattggcctgcaactgatgctgataacaaccgtttttcaaacggtgggattaaatatgat
ttaaaatggttaagagactcatgtgatctgatagttcgaggaagtggctcacagctttct
cgagatgaactggccatgacaatttgtcgagttctcgattctgacaaacctggggaagag
attgctggtgatctactggatcttgttggggatagtgcttttgagactgttcaggagctt
atcttgcatagaaaagagcttgttgaagcaattagtcatggcctgctagtattacgatct
gataagtcgccttcaaatgctcaaccgcgcatgcccagttacggcactcaggtcactgtg
cacactgagtccgagaaacagattgataaacttaggcgcaaagaggagaaacgccacaag
cgtggagttgggcaagggatcgaagacgacttttcatctacaagtttttcgtccttgctg
gaagcaagtgagaggaaaaatctatttgatgatgtgattggaagtggaccaggacctcag
tcattaggtgtatctgcacttccacagggaactgtgagaaagcatttcaaaggctatgaa
gaagtcataattcctccaataccaacagctccaatgaagcctggggaaagactgatagag
ataaaggaattagatgaatttgcccaagctgcttttcatggatacaaatccctcaatcgt
atccagagcaggatctttcagacagtctacaacactaatgagaatattctagtatgtgcc
ccaacaggagctggcaaaacaaatatagctatgatttctattctacatgagattggacag
catttcaaggacggttacctgcacaaaaatgaatttaagattgtttatgttgctccaatg
aaggcattagctgctgaagttacagctacatttagccatcggttagctccattaaacatg
acagtaaaggagcttacaggagacatgcaactttctaagaatgaacttgaaggaactcaa
atgatagtgaccacacctgaaaaatgggatgtcatcacgcgcaagagcagcgacatgtca
ctttcaatgcttgttaagcttttaataattgatgaagttcaccttttgaatgacgataga
ggtcctgttatagaagcattagttgctcgtactcttcgtcaggtcgagtcaactcaatca
atgattcgcattgtgggtctctcagccactctgcctaattatttggaggtggcacagttt
ttgagggtgaatccggactcggggctctttttctttgattctacctaccgtcctgtgcct
cttgcgcagcagtacattggtatcagtgagaaaaattatatggctcgcactgagctgctg
aacaagatttgctactacaaggttgttgattccctaaagcaaggtcatcaagcaatggtc
tttgtccattcacgcaaagatactgggaagactgccgaaagactggttgagcttgcccga
gaggacaataatctagagctttttcagaatgagacacatccacagtttcacttgataagg
aaggaggttatgaagtctagaaacagagaattagttggactctttgattctgggttaggt
attcatcatgctggaatgcttcgttctgataggggtcttactgagaggcttttttctgat
ggattgctaaaggtgcttgtctgcacagcaactttggcatggggagttaacttacctgct
cacactgttgtgattaagggcacacaaatatatgatccaaaggccggtggctggcgggac
ttaggcatgcttgatgttatgcagatctttgggcgtgctggaaggcctcagtttgacaaa
agtggtgaaggcattatcattacatctcatgacaagttagcccattacctgcggctactt
actaatcaactccctattgaaagtcagttcatcaactccctgaaagataatctgaatgct
gaggttgcgctgggtactgtcactaatgtgaaagaagcttgtgcttggcttgggtatacc
tatctatttataaggatgaagatgaatcctttggcatatggtattggatgggatgagata
gttgcggatccttctttgggtttaaaacaaaggtcttttataactgatgctgctcgtgcc
cttgataaagcaaagatgatgcgttttgacgagaaaagtggcaatttttactgtactgag
cttggtcgtattgcaagtcatttctatatacattattccagtgtggaaacttacaatgaa
atgttgaagcgacatatgagtgatagtgaggttattgacatggttgcacattcttctgag
ttcgaaaatattgttgtaagagaagaagaacaaatggaattagaaaatttagcacgtgaa
tgccccttagaaattaaaggtggtccctccagtaaacatgggaaaatttctatcctcatt
cagttatacatatcacgtggatccatagaggctttctcattgatatctgatgctgcatat
ataagtgcaagtttggctcgtattatgcgtgctttatttgagatatgcttgcggagagga
tggtctgagatgtcagctttcatgttagaatactgtaaggccgttgatcgtcaaatctgg
ccccatcagcatccactcagacaatttgatagggatatctccttagagatcttgaggaag
ctcgaagatcgaggggctgatctagatcgcctttatgatatggaggaaaaggatattgga
gctctgattcgttatgtacctggagggaagacagtgaagcaatatttgtcattttttcca
atggtcctgttatcagccactgtcagtcctatcacgagaactgtcttaaaggttgattta
cttgtaactcctgatttcatttggaaagatcgttttcatggaactgctcagcggtggtgg
attcttgttgaggattcggaaaatgaccatatatatcattcggagctgttcacactttca
aagagaacagcaagagcggatcctcagaagctttcttttacagtgccaatatttgaaccg
catccaccacaatattatatacgtgctgtttctgactcttggcttcaatcagaatctttt
tacactatatctcttcacaatcttgctttgcctgagtctcacacttcccatactgaactg
cttgatttaaaacctcttccaataaccgcgcttggtaatagaatgtatgaatccttgtac
agcttctcgcacttcaatccaattcagacacaggcttttcatgtcctgtatcacacagac
agcaatgttctcttaggagctcctacaggaagtggaaaaactatatcagctgagcttgca
atgtttcacctattcaattctcagcctgatatgaaggttatttatatagcacccttgaag
gccctagtccgagaaagaatgaaagactggaaaagacgacttgtcactcagctggggaaa
aagatggttgaaatgaccggtgattatactccagacttaatggcccttttgtcagcagat
atcatcatttctactcctgaaaagtgggatggaatcagccgtaactggcacactcgaagc
tatgttaaaaaggtagggcttatgattttggatgagattcacctacttggagctgatcgt
ggaccaattcttgaggtcattgtctcaaggatgagatatatctcatcacagacagaacgt
tcagtgcgatttgtgggtttatcaacagctttagcaaatgcagggaatttggctgactgg
ctgggtgtcggtgaagtgggactctataatttcaagccgagtgtgcgacctgtaccactt
gaagtccatatccagggataccctgggaaattctattgtccaagaatgaatagcatgaat
aagcctgcatatgctgctatctgttcacattcacctacaaagccagttcttgtttttgtt
tcctcgcgtcgacaaacaagactaactgctttggacctaattcagtatgctgcatctgat
gagcatccaaggaagttcttgaatatatcggaagatgcactgcagatgattctttcccag
ataacagatcaaaacctgaggcacaccttgcagtttggaattggtttgcaccatgctgga
ttgaatgacaaggatcgatctgtagttgaagaattgtttggaaacaacaagattcaggta
ttggtgtcaactagcacattggcttggggtgtgaatcttcctgcacatcttgttattata
aagggaacagagttttatgacgggaaatcaaaaagatatgttgattttcctataacagat
atcttgcaaatgatgggtcgtgctggtcgacctcaatatgaccagcatgggaaagcagtt
atattggttcatgaaccaaaaaagagtttctacaagaagttcctttatgaaccctttcca
gttgagagtagtctcagagagcacttgcacaatcacttcaatgcagaaattgtgtctggc
acgatttgccataaggaggatgccatccactacttaacctggacttatctttaccgaagg
ctgacggttaatccagcttattatggtttggaagatatcaatccagtggtcgtgagctct
tacttatcaaggttggtgcaaagtacatttgaggacctagaggacagtggttgtattaaa
atggttgaggatagagtggaacctatgattctaggctcaattgcatctcaatattacctt
agttatttaaccgtgtcaatgtttggctccaaccttggaccaggcctttcgcttgaattt
tcattgcatatattatctgctgcttcagagtatgatgagcttcctgtgcggcataatgag
gaaaaccacaatgcaacattagctgagcggcttccatacaaggtggacaaaaatcgtctt
gatgatccacatgttaaagcaaatttgctctttcaggcacacttttcccagttagagctg
ccagtcagcgactatgtgacagatctaaagtctgttttggatcagagtatacgtataatt
caggccatgatagatgtatgtgccaacagtggatggctttctagcacacttaactgtatg
catctaatgcagatggtcatgcaggggttatggtttgacaatggttctgctctacaaatg
ttaccctgcttgaacatcaatgttatggttacactcacaagacaaggaatatcaaatgtg
aagcaactattcgatgttcctagggcgactatgcagggtctacttggaagtttcccagct
tcaagtttatacgaggatttgcaaaggtttcctcgcatacatgtgaaattgagacttaag
aaaaagaatgaaagggcgagttctagttctcttaatgtgaggttggagaatgttaatgcc
aatcgaaagacaccaagagcatttactcctcgattccccaaggttaaagatgaatcgtgg
tggcttgtactcggaaatactgtctcttctgagttatatgcattgaagagagtttcattt
gctgaccacctggttacgaacatagattttccatcagacttagtcacatgccaggggttg
aagctcatcttggtctcagattgttatcttggttacgatctggagtactccttggaagaa
cttctcaaagatcagccgtga
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integrated database retrieval system
