KEGG   Chenopodium quinoa (quinoa): 110726888
Entry
110726888         CDS       T05764                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03082  ATP-dependent chromatin remodeling
cqi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110726888
   03083 Polycomb repressive complex
    110726888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cqi03036]
    110726888
Enzymes [BR:cqi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110726888
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     110726888
   HDAC complexes
    Sin3A-HDAC complex
     110726888
    BRAF-HDAC complex
     110726888
    REST complex
     110726888
    SHIP complex
     110726888
    MiDAC complex
     110726888
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110726888
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110726888
  Chromatin remodeling factors
   NuRD complex
    110726888
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110726888
NCBI-ProteinID: XP_021762096
LinkDB
Position
Unknown
AA seq 429 aa
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPEKQHRFMTEMAKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNHLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDLFFPGTGDVKENGEREGKYYAINVPLKDGIDDTSFTRLFKT
IISKVVEFYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTDLPNEIPENEYIKYFGPDYSLRIPNGHIENLNSKSYLTTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDENPDERISQHTQDKMIQRDDEYYDGDH
DNDQNMDDV
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgcgctccaaagataaaatctcttacttctacgatggtgatgttggtagtgtatatttc
gggccgaatcatccgatgaagcctcacagattatgtatgacccatcaccttgttctgtcc
tacgaccttcacaaaaagatggaaatttataggcctcataaagcgtatccagtagagcta
gcgcagtttcattcggctgattatgtcgagtttttgcatcgaattacgcccgaaaagcag
catcgcttcatgactgaaatggccaaatataatcttggagaagattgtccagtctttgac
aatttgtttgagttttgccaaatttatgctggcggaaccattgatgctgcacgtaggttg
aataatcacctttgtgacattgctataaattgggcggggggattgcatcatgcgaagaaa
tgtgaggcgtctggattttgttacatcaatgacttggttttggggattttagagcttttg
aagtaccatgcccgtgttctgtacattgatattgatgtgcatcatggggatggtgttgaa
gaggcattctatttcactgatagggtgatgactgtcagtttccataaatttggagatctc
ttctttccaggaacaggagatgtcaaggaaaacggggaaagggaagggaaatactatgcc
ataaatgttcctctcaaggatggtattgatgacactagctttacaaggctgttcaagacg
atcatttccaaggttgttgaattttatcagcctggagtgattgttctgcaatgtggtgca
gattcacttgctggtgacagattaggctgcttcaacctctctatcgatgggcatgcagag
tgcgttaggtttgtgaagaaatttaatcttcccttgctggttactggaggaggtggctac
acaaaggagaatgttgctcgatgctggactgttgaaacaggagttcttttagatactgat
ttaccaaatgagattccagagaacgagtatatcaaatactttggaccagattattccttg
aggattccaaatggacatatagagaacctgaacagtaaatcatacttgacaacaatcaag
atgcaagttctcgaaaatcttcggtgtatccaacatgcacctagtgtacagatgcaagag
gtcccccctgatttttatattcccgactttgatgaagatgagaatcctgatgaacgcatt
agtcagcacacacaggataagatgatccagagggatgatgagtattatgatggtgatcat
gacaatgatcagaacatggacgatgtatag

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