Chenopodium quinoa (quinoa): 110726961
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Entry
110726961 CDS
T05764
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cqi01009
]
110726961
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110726961
Protein phosphatases and associated proteins [BR:
cqi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110726961
Membrane trafficking [BR:
cqi04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
110726961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
110726961
NCBI-ProteinID:
XP_021762197
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MESRPSVSGRFTLESATASTSSSSSSPSRENCISRTSSNSSLSSKAIFEHNLSSILNNPH
SSDASSWLGWWSSPTSVILPEFAPINTSKPGLDANKSDFQPYLNSISEHYGRFEDIRNHS
SKENVDIVENIGGQGELLVACLREVPALYFKEDFELEDGGTFRAACPFSTMNENLVLQER
LSQYLDVVEMHLVKEISLRSNSFFEAQQQLGDLNVKIVEGCKRIRELKETIRLLDADVVG
SAREIQEFSSMRGNLLELQQKLRLILYVDQALGALKLLVASADCAGALDVADDLRQLLDG
DELTGLHCFRHLRDHVAASMDSIYSILSAEFMRASLHDAGDLDAIIVSAAKERASIPSNG
RLDDVKLDEEETSNFRDLVLPIVIGLLRTAKLPSVLRMYRDTLTADMKTAIKNAVAELLP
VLIARSQESDFSTGEKTGDADGGGSSLASRLRSLSSESFVELLAAVFKIVLAHLVRAAEV
KKSIEWIMSNLDGHYASESVAAAIAHGAAASEAAQDDSDNQNQVNHTIAYSSQRNATKAP
SLQGKATELTSTSNVSKNFRADVLRENAEAVFAACDAAHGRWAKLLGVRALLHPKLRLPE
FLSIYSITQDFINATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRVSKIKAVLDQETWSE
VDVPDEFQAIVASMHGSDSLITENFGDDQGSSIVSSNGVSTVVDESNAEHHIERTDSNNV
SDDASIQEKSQHLGEANDASKADAGTSALSKISNTKDRGKSTSQTLMYRGVGYHMVNCGL
ILLKMLSEYIDMNDSLPSLSSEIVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKH
LALASQVISFTYAIIPDIKQVLFLNVPETRKPLLKSEIDRVAQDYKVHRDEIHTKLVQIM
RERLLVHLRGLPHIVESWNKPDDGDTQPSQFAKSLTKEVGYLQRVLSRMLHEADVQAIFR
QVVIIFHSQISEAFSRLEISTPQAKSRLYRDVQHILGCIRSLPTDIASKSGVANWGHLDE
FLAQRFDNEGDQ
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcgaccttctgtttcgggaaggtttactctcgaatcagcaacagcgagtact
tcatcatcatcatcttcaccatcaagagagaattgtatctcaagaacaagctcgaattct
tctctttcaagtaaggcgatttttgagcataatttgtcttcaattcttaataatcctcac
tctagtgatgcttcttcttggcttggatggtggtcttcgccgacatcggtgattttgcct
gaatttgccccaattaatacttcaaaacctgggttagatgctaataaatctgattttcaa
ccgtatttgaattcgatctcggagcattatggtcgattcgaggatattcgtaatcatagt
agtaaggagaatgttgatatagttgagaatattggagggcagggagaattgttggttgct
tgtttgagagaagtgcctgcattgtactttaaggaggattttgagcttgaggatgggggg
acttttcgggctgcttgcccgttttcgacgatgaatgagaatttggtgctgcaggaaagg
ttgtctcagtatttggatgtggtggagatgcatttggtgaaggagatctcgttgcggtcg
aattcgttctttgaggctcagcagcagctgggggatttgaatgtgaagattgtggaaggg
tgtaaaaggattagggaattgaaggagaccatcaggttgctagatgctgatgttgttggg
tcggcgagggagattcaagagtttagttcaatgaggggcaacttgttagagcttcagcag
aaactgaggcttatattatatgttgatcaagctcttggtgctcttaaactgcttgttgca
tctgccgattgtgctggagcattggatgttgctgatgatttgcggcaattattggatggg
gatgagttgacaggtttgcattgctttcgtcatctgcgggaccatgttgctgcatcaatg
gactccatatacagcattctttcagcagaattcatgcgcgcatctttgcatgatgccggg
gatttggatgctataattgtatcggcagcaaaagaaagagcttctatacccagtaatgga
aggcttgatgatgttaagctagatgaagaagaaacttctaatttccgagatcttgtttta
cctattgtgattggactgcttagaacggcaaaactaccatctgtcctgagaatgtatcgt
gatacacttactgctgatatgaagacagctatcaagaatgctgtggcagagctgctacca
gttctgattgctcggtctcaagagtcagatttctcgactggagagaagactggtgatgca
gatggtggaggctcgtctcttgcgagcaggttaaggagcctgtcatctgaaagctttgtt
gagctattagctgctgttttcaagattgtcctggcacatctagttcgggctgctgaagtt
aaaaagtccattgagtggatcatgtctaatttggatggtcactatgcatctgagtcagtt
gctgctgctattgcacatggtgctgcagcttcagaagctgcgcaagatgatagtgataat
caaaatcaagtcaatcacacaattgcatattcttctcaaagaaatgctaccaaggctcct
tcattacaagggaaggctactgaactgacaagtacatctaatgtatccaaaaatttcaga
gctgatgtgttgcgagaaaatgctgaagctgtctttgcagcttgtgatgctgcccatgga
aggtgggcgaaactcctaggtgttcgtgctcttcttcatcccaagttgcgtttgccggaa
tttcttagtatatacagcatcacccaagattttataaatgctacagaaaagattggtgga
aggttgggatatagtatacggggtacattgcagtcacaagcaaaagcctttgttgatttt
cagcatgagtctcgtgtgtcaaaaattaaggcggtgttggatcaagaaacatggtcagaa
gttgacgttcctgatgagtttcaggccattgttgcttcgatgcatggttcagattcttta
attactgagaactttggtgacgatcagggcagttcaatagtttcaagcaatggtgtgtca
actgtggttgacgaatccaatgctgagcatcatatagagcgaactgattcgaacaatgtt
tccgatgatgcgtccattcaagagaaatctcagcatttaggcgaggccaatgatgcaagt
aaagctgatgctggtacttcagccctcagcaaaattagcaatacaaaggaccgtgggaaa
tcaacttctcaaacattaatgtacaggggcgttggatatcacatggttaactgtggctta
atattactgaagatgctgtcagagtatattgatatgaatgatagtttgccgtcactttca
tcagaaatagttcaccgcgttgtagaaattttgaagttttttaatacaaggacctgccag
ctggttcttggcgctggtgctatgcaggtgtctggtttgaaatcaatcacttccaaacat
ttggctttggcaagtcaagtcatcagttttacatatgctattattccagatatcaagcag
gttctttttctcaatgtaccagagaccagaaaaccactgttaaagtcagagatcgatcgg
gtggcacaggattataaggtccatcgggatgaaatacatacaaagctggttcagattatg
agggagaggttgttagttcatttacgaggattacctcatattgttgagagttggaataaa
cctgatgatggtgacacacagcctagtcaatttgcaaaatcattaacgaaggaggttggc
tatcttcaacgtgtcttgtctcgtatgcttcatgaggcagatgtccaagcgattttcagg
caagtggtcataatatttcattcacaaatttccgaagcattttcccgcttggagatcagc
actccacaagcaaagtcgagactctatcgggacgtccaacatattctagggtgtatacgc
tcacttcctactgatattgctagcaagtcaggtgttgcaaattgggggcaccttgatgaa
ttcttggcccaaagatttgataatgaaggtgatcagtag
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