Chenopodium quinoa (quinoa): 110727616
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Entry
110727616 CDS
T05764
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110727616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cqi04121
]
110727616
03036 Chromosome and associated proteins [BR:
cqi03036
]
110727616
Ubiquitin system [BR:
cqi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110727616
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
110727616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
110727616
NCBI-ProteinID:
XP_021762895
UniProt:
A0A803L299
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MENSTQESHLLPNNTLVTYDSPYPLYAMSFSLSSAGISRRSSDQIIAVGSFIEEYNNRID
ILTFDEQTLTQNLSFPHPYPPTKLMFQPSASSPPILASSADFLRLYSFKNDSIELVSKLN
NSKSSDFCAPLTSFDWNDVVPQRIGTSSIDTTCTIWDIEKCVVETQLIAHDKEVYDIAWG
EAGVFASVSADGSVRIFDLRDKEHSTIVYESPEPDTPLLRLAWNKQDLRYMATTLMDSNK
VVILDIRSPTMPVAEFERHQASVNAVAWAPHSGRHICSVGDDSQALIWELPTVASPNGID
PLSMYNAGSEINQLQWSAAQPEWISIAFSNKLQLLRV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcaacccaagaatctcacctccttccaaacaacaccctcgtaacgtacgat
tcaccttacccgctatacgctatgtcgttttctctctcctccgccggaatttctcgccgg
agctccgatcaaatcatcgccgttggaagtttcatcgaagaatacaacaatcgcatcgat
atcttaaccttcgacgaacaaaccctaactcaaaatctctcatttcctcatccgtatcct
ccgacaaaattgatgtttcaaccttcagcttcatcgccgcctattctggcatcgtcggcc
gattttctcagattgtattctttcaagaatgattcgattgagttggtgtctaagctcaat
aactcgaaatcgagcgatttctgtgcgccattgacgtcgtttgattggaacgacgtcgtt
cctcaacgaattggaacttcaagtattgatacaacttgcacgatttgggatattgagaaa
tgtgtggtggaaactcagttgattgctcatgataaggaggtttacgacattgcttgggga
gaagctggagtttttgcatcggtttcggctgatggaagtgttaggatttttgatttgagg
gataaggagcattctacgattgtttacgagtcgccggagccggatactccgttgttaagg
ctagcttggaacaagcaggatttgaggtatatggccaccactttgatggatagtaataag
gttgtgatattggatattcggtctcctacgatgccggtggctgaattcgagaggcaccag
gccagtgttaatgctgtggcgtgggcgcctcatagtggccggcatatatgctctgttggt
gatgattctcaggcgcttatatgggagcttcccaccgttgcttcccccaatgggattgat
cctttgtcaatgtacaatgctgggtcggaaataaaccagttgcagtggtctgctgctcag
ccggagtggattagtatcgctttctcgaataagttgcagctgctgagagtttga
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integrated database retrieval system
