Chenopodium quinoa (quinoa): 110728316
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Entry
110728316 CDS
T05764
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi00040
Pentose and glucuronate interconversions
cqi01100
Metabolic pathways
Module
cqi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110728316
Enzymes [BR:
cqi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110728316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
DUF6370
Motif
Other DBs
NCBI-GeneID:
110728316
NCBI-ProteinID:
XP_021763668
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MSLTSHFLILVGVLTILISSFLPVCLSSYPFPEPDSRNYITKYSTNNKNISDDDDKRTYN
YNYELDSQSLDNYDKVILDRIRHHSHRARSRAPSPSSSPSRIINVEHFIKSGRRRDHTKG
FKRAWKKACSTKGAILLVPRNKKYRVRPIKFSGPCRSPLTIKIKGRIEASTNLADYRDRL
HWLQFENITNFKVKGRGTIDGRGHIWWQNSCKINTTKPCQHAPTAVTFDGCKNFIVDGLK
ITNAQQMHMTFQKCTAVRASHIVIKSLGNSPNTDGIHVTETRNIQITRSRIGTGDDCVSV
VSGSKNVQVSDITCGPGHGISIGSLGKGNSKAHVSNVLVNKARLFGTLNGVRIKTWQGGQ
GYAKNVVFQNIAMKNVSNPIIIDQNYCDQKTPCQEMVIQTLLSYTCKL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacatcacattttcttatacttgttggtgttcttaccattcttatttcttcg
tttcttccggtttgtctatctagctaccccttcccggaacccgattcgaggaattacatt
acaaagtattctactaacaacaagaatattagtgatgatgatgataagaggacttacaat
tacaactatgagcttgattcacaaagtctcgacaattatgataaggtaatccttgatcgt
attaggcaccattctcatcgagctcggtctagagccccttccccttcatcttcgccttca
agaattatcaatgtcgaacattttatcaagtcaggaagaaggagagatcataccaagggt
tttaagagagcttggaagaaggcatgttcaaccaagggtgcaatattgctagtgccaaga
aacaagaagtatagggtcaggccaatcaagttctctggaccgtgtcgttctcctctcacc
ataaagatcaaaggaagaatcgaggcgtctaccaatctagcagactacagagatcgacta
cattggctacaattcgaaaatataactaacttcaaggttaaaggtcgaggcaccattgat
ggcaggggacatatttggtggcagaattcttgtaagatcaatacaactaagccctgtcaa
catgcacctacggcggtaacctttgatggatgcaagaacttcatagtggatggattaaag
ataacgaatgcacaacagatgcatatgacatttcagaaatgcactgctgtaagagcttca
catatagtcataaaatcgctgggaaatagccctaacacggatggaattcatgtcaccgag
accagaaacattcaaataacaagatctcgtattggaacaggcgatgattgtgtatcagta
gtaagtggatcaaagaatgttcaagtgtccgatataacttgtggaccaggccatggaatc
agtattggaagcctaggcaaaggaaactccaaggcacatgtttcaaatgtattggtaaac
aaggcaagactttttggaacccttaatggagtcagaattaagacttggcagggaggacaa
ggatatgcaaaaaatgttgtatttcaaaatattgcaatgaaaaatgttagcaatccaata
atcattgaccagaactattgcgatcaaaaaacaccttgtcaggaaatggtaatacaaaca
ctcctttcatatacatgtaaattatga
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