KEGG   Chenopodium quinoa (quinoa): 110728796
Entry
110728796         CDS       T05764                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110728796
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqi03041]
    110728796
Spliceosome [BR:cqi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110728796
 Complex B
    110728796
 Complex C
   U2 SnRNP specific factors
    110728796
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N Curto_V2 LLPH
Other DBs
NCBI-GeneID: 110728796
NCBI-ProteinID: XP_021764140
LinkDB
Position
Unknown
AA seq 509 aa
MSSTLLELTRGSHEEVERLERLIVKELQNEGASSRDRLLQSHRVRFMIEHILSTTDKLVE
IYEDKDGARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPSARVIDAEEEYEQMF
KEDPLLDFSGEEASGRYLDLHEFYNRYINSKFGEPMDYVIYLEKFSQPHMIPCKRKMTRQ
YKEYIIELLEYLISFFERTEPLKDLDRIFSKVVNDFEEQWANGKVKGWENEGQENGHISQ
TALIDLDYYSTVDELLELGPEKLKEALAALGLKTGGTIQQRAERLFLTKNTPLEKLDKKH
FAKPQRGSKQNGNGDLQFQKQDDIKELALVEAKMVKLCELLEEIIVRTKENSVKKQGMTY
EELALEHEEEDVHAESESDEEDQPIYNPLKLPLGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIQDAKNLWEKIQRRQGLHKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgactcttctggaactaactcgaggttctcacgaagaagtagagagattagag
cgcctcattgtcaaggagcttcagaatgaaggtgcttcttctagagatcgtctcttacag
agtcatcgtgttcgtttcatgattgagcacatcctctctaccactgataaactcgttgag
atttacgaagataaagatggtgctcggaaagatgaaattgccgcacttggaggtcaaact
gctactggtaccaatgtgtttagtgccttttatgatagattgaaagagattcgtgagtat
cacaggcggcatccatctgcgcgtgtcattgatgctgaagaggaatatgagcagatgttt
aaggaggacccattgcttgattttagtggagaggaagcatctggccggtacttggattta
cacgaattctacaataggtacattaattcaaaatttggtgaaccgatggattacgttatt
tatttagagaaattctcacagccacatatgattccttgcaaacgaaagatgacaaggcaa
tacaaagagtatattattgagctattggagtatctgatctctttctttgagagaacggag
ccattaaaagatctagatagaatattctcaaaggtagtaaatgattttgaagagcaatgg
gccaatgggaaagtaaagggatgggagaatgagggacaagagaatggacatatttctcag
actgccttgattgatcttgattattatagcacagtggacgagcttttggaattggggcct
gagaaattgaaagaggccttggctgctctaggactgaaaacaggtggtactatacaacaa
agagcggagagactattccttaccaagaacactcctctcgaaaagttggacaaaaagcat
tttgctaaaccacaacgtggttcaaagcagaatggtaatggcgacctgcagtttcagaag
caggatgatattaaggagttggccttagtagaggccaagatggtaaagctttgtgaactg
cttgaagagattatagtccgcactaaagaaaattctgtgaagaagcagggaatgacttat
gaggagcttgcgctagaacacgaggaggaagatgtacatgctgaatctgaaagtgatgaa
gaagatcaaccgatatacaatcctctaaagttgcctcttggttgggatggaaaaccaata
ccatattggctgtataagctccacggtcttggacaggagtttaagtgtgaaatttgtggg
aaccatagctactggggccgtagagctttcgagagacattttaaagaatggcgtcaccaa
catggaatgcgctgtcttggtattccaaacacaaagaactttaatgaaattacatctatt
caggatgctaagaatctctgggaaaaaatccaaagaagacaaggattgcacaagtggcga
ccagaccttgaggaggaatatgaagataaagaggggaatatctataataagaagacatac
actgatctacagcgtcaaggattgatatag

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