Chenopodium quinoa (quinoa): 110729673
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Entry
110729673 CDS
T05764
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110729673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110729673
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
110729673
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
110729673
NCBI-ProteinID:
XP_021765137
LinkDB
All DBs
Position
Unknown
AA seq
201 aa
AA seq
DB search
MLNPVPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKINYMKEGMRTSVEAILLVQEH
NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPSLHPEWQIGECVGVW
WRPNFETIMYPYCPPHITKPKECKKLYVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRY
GPVLSSIPQQLSRFQFKMISP
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacccagttccggttgtaaacacataccctttatcaagctacactttcggcacc
aaagagcctaagatggagaaagatacttctgttgctgatcgccttgctcgcatgaaaatc
aattacatgaaggagggtatgagaacaagtgtggaagcaattctactggtacaggagcac
aatcatccacacatacttcttctccaaattggaaacacgttctgcaaacttcctggtggt
cggttgaagccaggcgagaatgagattgagggtctgaaaagaaaattatccagcaagctt
gctgcaaactctccttctctacatccagaatggcagataggggagtgtgtgggtgtttgg
tggcggccaaactttgaaactattatgtatccctactgccctcctcatattacaaaacca
aaggagtgcaaaaaactctacgttgttcatctatccgagagagagtactttgctgtgccg
aaaaacttgaaacttcttgccgtgcctttgtttgaactctatgacaatgtccagagatac
ggacctgtcttatcctccattccacagcagctgtcaagattccagtttaaaatgatctct
ccctga
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