Chenopodium quinoa (quinoa): 110730538
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Entry
110730538 CDS
T05764
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110730538
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110730538
Spliceosome [BR:
cqi03041
]
Complex C
Other components
Complex C specific factors
110730538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
DEAD
HA2_N
AAA_30
AAA_19
AAA_7
T2SSE
Motif
Other DBs
NCBI-GeneID:
110730538
NCBI-ProteinID:
XP_021766037
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MAKFWKPGTEKPRLVEDEDGGVLFFYSSSSSSSSSSFGYANNIQQQRQRLPVHKRRDAIL
FLVENHATTIVVGETGSGKTTQIPQYLNEGGWADSGHVIACTQPRRLAVQSVASRVAEEM
GVKLGEEVGYVIRFEDVTTPGVTKIKFLTDGVLLREMMDDPLLSKYSVVMVDEAHERSIS
TDVVLGLLKKIQRRRPELRLIISSATIEAKSIASFFRVSKKHRGGAGDELGPKTEPAIIS
VEGRGFTVEINYVQEPVADYLRAAVSTVMLIHKQQTVGDILVFLTGQDDIDAAVQLLNEE
AQSSDRSSGEFLALPLYSGLSRAEQDLIFSPTPRGKRKVIISTNIAETSLTLEGIVYVVD
SGFSKQRFYDPLSDIENLVVAPISKASARQRTGRAGRVRPGKCYRLYTEEYYVNEMPAEG
IPEMQRSNLVSCVIQLKALGIDNILNFGWPASPSPEAMIRALEVLYSLGVLDDDAKLTSP
TGFQVAEIPLDPMISKALLASNELGCSEEMLTIASVLSVQSIWISVRGAQKQLDEAKLRF
AAAEGDHVTFLNVYKGFLQSGKSSKWCHKNFINYHAMKKVLETRDQLKRTAQRLGIVLKS
CDRDIQVVRKAITAGFFANACHLETYSHEGKYKTVRTSQDVYIHPSSVLFRVNPKWVVYY
SLVSTDRRYMRNVVTIDPTWLVEVAPHYYQYQGPGSSAKA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattctggaagcctggaaccgagaaacctcgactggtagaagacgaagatggc
ggcgttctcttcttctactcttcctcgtcttcttcttcatcttctagtttcggatacgcc
aacaacatccagcagcagcgccagcggctgccggtgcataagcgcagagacgccattctc
tttctagttgaaaatcatgctactaccattgttgtcggcgaaactggcagcggaaaaact
actcaaattcctcagtatttgaatgaaggaggatgggctgattctggtcatgttattgct
tgcactcagcctcgccgtctcgctgttcagtcagttgcttcaagggttgctgaagaaatg
ggtgttaaacttggagaggaggttggatatgtaatcagatttgaagatgtgacaactccg
ggtgttaccaaaattaagtttcttactgatggagtgttgctgagggaaatgatggatgat
cctcttctgtccaagtacagtgttgtcatggtagatgaagcacatgaaaggtctatttca
actgatgttgtacttggtctcttgaaaaagattcaaaggcgtaggcctgaactgcgtttg
attatatcatctgccactattgaagcaaaatccatagcttctttcttcagagttagtaag
aagcatcgaggaggagctggtgacgaacttgggccaaagacagaacctgccattatctca
gttgagggaagaggctttactgtcgaaatcaattatgttcaggagccggttgcagactat
cttcgagctgctgtatcaactgttatgttgatacacaaacagcaaacagtgggtgatatc
cttgtattccttacgggtcaagatgatattgatgcggctgttcagctgcttaatgaagaa
gctcagagttctgatagaagctcaggagaatttctcgctctgcctttatactccggactt
tcacgtgcagagcaggacttgatcttttctcctactcctagagggaaaaggaaggtcata
atatcgacaaatattgcagagacatcattgactttggagggcatagtctatgttgttgat
agtggcttctcaaaacagcgtttttatgatccgctatcagatattgagaatttggtggtg
gcacccatatcaaaggcttctgcaagacaaaggacaggtagggctggaagagtgagacca
gggaaatgttacaggttatataccgaggaatattatgtaaatgaaatgccagctgagggg
attcctgagatgcagagatcaaaccttgtctcctgcgtaatacagttgaaggctctagga
attgataatatcctgaattttgggtggcccgcatcaccatcaccagaagctatgattaga
gctcttgaagtattgtactctctaggtgtgcttgatgatgatgccaagctcacttcgcct
accggattccaagttgctgaaattccactggatcccatgatttcaaaagctttgcttgcg
tctaatgaactagggtgttcagaggaaatgcttactatagcatctgttctttctgtacag
tctatttggatctccgtaaggggagcacagaagcagctagatgaagccaagctccgattt
gctgctgctgagggtgaccatgtgactttcctaaatgtgtacaaaggatttctgcagtcc
ggcaaatcatcaaaatggtgtcacaagaactttattaactatcatgctatgaaaaaagtt
ctagagaccagagatcaactcaaaagaacggcacagcggctgggtatagtattaaaatct
tgtgacagagatatacaggttgtaagaaaggcaattactgctggattttttgctaatgct
tgtcatctggaaacttacagtcatgaaggaaaatacaagactgtccgtacttctcaggat
gtttatatccacccttcatctgttttgttcagagtcaacccaaagtgggttgtatactat
tctctcgtctcgactgatcgtcgatacatgcgcaatgttgtgacaatagatcctacatgg
cttgtagaggttgccccacattattatcagtatcaagggcctggttccagtgctaaggcc
tag
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integrated database retrieval system
