Chenopodium quinoa (quinoa): 110731254
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Entry
110731254 CDS
T05764
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110731254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110731254
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
110731254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
HofP
Motif
Other DBs
NCBI-GeneID:
110731254
NCBI-ProteinID:
XP_021766790
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MGSKREREEVKDSEVKRQKMEEDEAGSPKTHAFENPLLPLASYDDDDEEEEERRRDAIRR
RAGEGNGKEEAGVNGGVNGVVADDVEDDEDEEDLGFHQAKRNRAVEVRRDCPYLDTVNRQ
ALDFDFEKFCSISLTNLNVYACLVCGKYYQGRGPKSHAYTHSLEAGHHIFINLKTEKVFC
LPDGYEINDPSLDDIRHVLNPRFAREQVEQLDRSKLWARALDGSDYLPGLVGLNNIKETD
FVNVTIQALMRVTPLRNFFLIPENYQHSRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQ
AVMKASNKKFRIGAQSDPLDFVTWLLNTLHKDLKKSSKKNTSIIHQCFQGELEVVKEMQS
KGTERREGGDDQNGGSENPNVVRETSKMPFLMLSLDLPPPPLFKDVMEKNIIPQVPLFNI
LKKFDGETITEVVRPQIARMRYRVTKLPPYIIMHMRRFTKNNFFVEKNPTLVNFPVKNLE
LKDYIPLPTPNDDEKLRSKYDLIANIVHDGKPSEGSYRVFVQRKSEEQWYEVQDLHVSET
LPQMVALSEAYIQVYELQQQH
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtaagagagaaagagaagaggtgaaggatagtgaggtaaagaggcagaagatg
gaagaagacgaggcggggtcgccaaaaactcatgctttcgagaacccacttcttccatta
gcttcatacgatgatgatgatgaggaagaagaggagaggaggagggatgcgattcgaagg
cgtgccggtgaggggaatggcaaggaggaagcaggggttaatggtggtgtgaatggggtt
gttgctgatgatgttgaggatgatgaagatgaggaggatttaggttttcatcaagccaag
cgcaatcgggccgttgaggtcaggagggattgcccttaccttgatactgttaacagacag
gctttagattttgattttgaaaaattttgctcaatctcgttaacgaacttgaatgtatat
gcatgtctggtgtgtggtaagtattaccaaggaagaggccccaagtctcatgcatatact
catagcctggaggcaggacatcatatcttcataaatttgaagactgagaaggttttttgc
ctacctgatggatatgagattaatgatccatctttagacgacatccgtcatgttctaaac
cccaggtttgccagggaacaagttgaacagctagatagaagcaagctgtgggcaagagct
cttgatggctctgattacctgcctggattggtaggactcaataacatcaaggaaaccgat
tttgttaatgttacaattcaagcgcttatgcgtgttacgcccttgaggaacttcttcctg
attccagagaactaccagcactctagatctcccctggttcatcgttttggggagcttact
cgtaaaatctggcatgcaagaaatttcaagggacaggtgagtccccatgaatttttgcaa
gctgtgatgaaagcaagtaacaaaaagtttcgaataggtgcacaatctgacccacttgat
tttgtgacttggctccttaacaccctccacaaagatctcaaaaaaagctcaaagaaaaac
acaagtatcatccatcagtgcttccagggagaactggaagttgtgaaagaaatgcagagt
aaaggtactgagagaagagaaggtggcgatgatcaaaatggtggatctgaaaaccctaat
gttgtcagagaaacttccaaaatgccatttctaatgcttagccttgatttgccacctccg
cctctttttaaagatgttatggagaaaaatattatccctcaggttccacttttcaacata
ttgaagaagtttgatggtgagaccataacagaagttgtgcgtcctcaaatagctaggatg
agatatcgtgtaaccaaattgccaccttacatcattatgcacatgcggcgatttacgaaa
aacaacttttttgttgagaagaatcccacccttgttaattttcctgtgaagaacctcgag
ctgaaggattatatccctctgcccacaccaaacgatgatgagaaattgcgttcaaaatac
gatttaattgcaaatattgttcatgatggcaagcccagtgaagggtcatacagagtcttt
gttcaaaggaagtcagaggaacaatggtatgaggtgcaggacttgcatgtatcagaaaca
ctacctcagatggttgctctttcagaggcatacattcaggtgtatgagctacagcagcaa
cattga
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