Chenopodium quinoa (quinoa): 110731263
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Entry
110731263 CDS
T05764
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110731263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110731263
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
110731263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Zn_Ribbon_1
DZR_2
ZnF_RZ-type
DZR
DUF1258
Motif
Other DBs
NCBI-GeneID:
110731263
NCBI-ProteinID:
XP_021766799
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MSFDLMLKPTCGRCGSSSDLYGSNCKHLTLCSNCGKTMAENRAKCFECGTPITRLIREYN
VRTNSSNDKNYFIGRFPTGLPNFSKKKSAENKWTLQKEGIQGHQGRQISDTMKEKLKNKP
WMLEDETGQSQFQGHLEGAQSAIYYLLMMQAKEFVAIPAGSWYNFNKVAQYKQLTLEEAE
EKMKNRRKFVDGYERWMMKTASNGAAAFPTFDANLVKDISTGGAGKGRKKSTAEKEGNAS
EKGEDEGEEDADRKPKIGSSNGADDDDGNESPAGGDFDDEDDNIEKGDDWEHEEIFTDDD
EAVGNDPEEREDLAPEVPAPPEIKQDEDDDEANEEEGGLSKSGKELKKLLQGQANGLNES
DRDEEDDSSAKKKKDEEDDDDDDEEDRPSPVLAPKLKDPKDEPADSSPAKPGPGGSSRAT
PASKSAKGKRKNGDDTKSSSAAPHKKVKTEIDVKSAAKENASKNGGAPKVTPPSSTKAGT
STSGTPAQGPVSEEEIRAVLLQKAPVTTADLVATFKSRLKSPEDKKAFADILKRISKIQK
SDNKSFVVLRERGR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgatttgatgctgaagccaacatgtggtcgatgcggatcaagcagcgatctc
tacggcagcaattgcaagcatttgacgctttgctctaactgcggtaaaactatggcggaa
aatcgcgctaaatgcttcgaatgtggcactcctatcactcgattgattcgtgagtataat
gttaggacgaattcgagcaatgataagaattacttcattgggagatttccgactggattg
ccgaatttttccaagaagaagagtgcggagaataaatggactttgcagaaagaagggatt
caagggcatcaaggtcgccagattagcgatactatgaaggagaagttaaagaataagcct
tggatgctggaagatgaaactggtcaatcacagttccagggtcatttggaaggtgcacaa
tctgctatatattatctcctaatgatgcaggccaaagagtttgttgctataccagctggt
tcttggtacaactttaataaggttgcacaatataagcaacttacgttagaagaggcagag
gagaagatgaaaaataggagaaagtttgttgatggttacgaaagatggatgatgaagaca
gccagcaatggggctgctgcattcccaacctttgatgcaaatcttgtgaaagatatttct
actggtggtgcagggaaaggtcgcaagaaatcaactgctgaaaaggagggtaatgcttca
gaaaagggagaggatgaaggagaagaggatgcagataggaagccaaaaattggatctagc
aacggagctgatgacgacgacggcaatgaaagccctgctggaggtgactttgatgatgaa
gatgataatattgagaaaggtgatgactgggagcatgaagaaattttcactgatgacgat
gaagctgttggtaatgatcctgaggagcgggaagacctagctcctgaagttcctgcaccc
ccagagattaagcaggacgaggatgacgatgaggctaatgaagaggagggaggactgagc
aaatcaggaaaggagctgaaaaaattgctgcagggacaggccaatgggcttaatgagtct
gacagagacgaagaagatgacagctcagccaaaaaaaagaaagatgaagaggatgatgat
gatgacgatgaggaagatcgcccttctcccgttttagctccgaagttgaaggaccctaaa
gatgagccagctgatagcagccctgcaaaaccaggtcctggaggatcttctcgggcaact
cctgcctcaaaatcagcaaaaggaaaaaggaaaaatggtgatgatacaaaatcttctagt
gcagctcctcataagaaggtgaaaactgaaattgatgtgaaatcagccgcaaaggaaaat
gcatcaaaaaatggtggggccccaaaagttacaccaccatcgtctacaaaggctggtaca
tctacttcaggaacacctgctcagggccctgtctcggaagaagaaattagagctgtattg
ttgcaaaaagcgcctgtaaccactgctgatcttgtggccacgtttaaatcaagactaaag
tcaccagaggacaagaaggcgtttgctgatattttgaagcggatctctaagatacagaag
agcgataacaagagtttcgttgtgctaagggagaggggtagataa
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