Chenopodium quinoa (quinoa): 110731652
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Entry
110731652 CDS
T05764
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110731652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110731652
Membrane trafficking [BR:
cqi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110731652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
Clathrin
VPS8_N
TPR_VPS8_2
Beta-prop_EML
WD40
CARD
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_WDHD1_1st
zf_RING_Vps8
WD40_Prp19
zf-RING_2
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
110731652
NCBI-ProteinID:
XP_021767219
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MTNYSATSQSPPEIEELDLDSFLRRHNAASSDEDDAGDNRNSDILHCSIDDILNDSSSDS
DHDAISVSSSVSQTKTLNSDNKLLNSTQSRYSLIQRLKSDEFAENSSRKPPIPPQNVRNS
SIFGGGVSRKPGAAFAAAAAASRNVRMPRAAVIKSRRALSVSLEGKVSDGDELLGFVRDD
VKSEGCDGDGNVSEVVGEVIEEREDGDESGSVMDVGKGEMIASLEKQEDSEFEDSSVEQV
IEKREDDEKLGSELEKDGELVSCSEKNDDIPECWDVERKDSVDFGEKRIWHSLDDEGEER
IEEKNVVSLHENSVDEGGGLSLEVENEKKEEQDYGFGPQQVQESEKSLLVLNSDEFGSGG
DEGSGSDEVKELGLAEDRIAQLESEIDSTKTEEKLFPVKKQLELAEELEIKQASTGQDWE
EGAAAQPMRLEGVRRGSTVLGYFDVNADNPISRAIKSQAFIRDYGTSQVIAVHLNYIALG
MSKGVVVVVPSKYSAHLPDNMDPKMLLLGAHADRSPVPVTSICFNQQGDLLLAGYGDGLI
TLWNISRGTVARVVTGEHAAPVVHTLFLAQDFQVTRQFKAVTGDCKGHVQLHEFSYVPII
GVTVKTLCLLDGQRTGTVLCASPLLPDEFTFSGNTTGSGSSIGGVMGGVGGASPWKFFNE
GSSLSEEGVVIFVTHQTALVVRLKPSLEVYAQLSRPEGVREGSMPYTAWKCTTKSRGSST
ENVNAEALERISLLAIAWDRKVQVAKLIKSELKDSEKPELKESGKWTLRVCGKWTLESAA
VGLAWLDDQMLVILTLTGQLCLYTRDGTLIHQTSYASNETGGDDLISFHTYFTNVFGNPE
KAYHNCLAVRGASIYILAPRHVVVSRLLLWRERIEVLRNAGDWMGAFNMAMTLYDGQAHG
VIDLPRDLNAIQEAIMPYLVELLFSYVDEVFSYISVACFNQIDKEEEADNSLTNSNAASS
EIKEQFTRVGGVAVEFCVHIRRTDILFDEIYSKFVAVQHRDTFLELLEPYILKDMLGSLP
PEIMQALVEHYNSKGWLQRVEQCVLHMDISSLDFNQVVRLCRENGLYGALIYLFNKGLDD
FKTPLEELLNVLRNHKRDAATAAVGYRMLVYLKYCFLGLAFPPGHGKLPSERLPSRRMEL
LQFLLQDSGGSKSQTGASLTSTGAFLNLHYLLELDTEATLDVLRMSYLEDEQSKLDNSLP
NSPDATDDNPIDNELIAGDQDMLVQKIVDALVIVLDVNISQSVRSTGDDDASMVVWPSKK
DIGYLIEFVASYVACKRANVSKSVLSQILEYLTSENHLALDDREQKHESKKTREKKVLAL
LGAVPQTEWNASYVLHLCEKAQFHQVCGLIHTIRHNYLAALDCYMKDVDEPVHAFSFIDG
ILLQLSETESAAFQSAVIPRISELVTLSREFTFCLVIYHLNKERGHILSNLQSTPRSLFL
YLKTLFEVYHSGALNFSCIEGDGIFDGPWGRQNDGNITLAAYLERISEFPKIIQNNPVEV
NDDIVELYLELLCQFEPDSVLKFLDTFENYRVDRCLLLCQKYEIVDAASFLLERVGDVGS
ALLLTLSGLNDKYIMLGTAVGNTISDMDVGKYIHKDCFAAAFGLKEVQDIKKVLHSCIGL
CQRNSPRLNPEESESLWFHVLDSFCRPLLISQGNSENGIVTQSSNFKDDLEANSVSWTIY
RTQKCAPVLKRIFSEFVKEIVEGMIGYVRLPSIMAKLLSDNGSQEFGDFKLTILGMLGTY
SFERRILDTAKCLIEDDTFYTMSLLKKGASKGYAPRSLQCCICNCSFKSSSNFGIRVFNC
GHATHIQCDVQENATSSQSSSGGCPICVHKKKIRKAKGKMAELGLVSASPSTSRRAQSTS
ILHPHELDVFENSTGPQTSRFEILNRLQKNQRLVTYDTMPQLRLAPPSVYHEKVNKRNHF
TAGGSREGLMDSEKPSRNKQLRDLKVKGSSVRFPLKSKIFGKEKTRVN
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgactaattattcagccacctcacaatctccgccggagatagaggaactcgacctcgac
tcatttctccggcgacacaacgccgcctcctccgacgaagacgacgccggagacaatcga
aattctgacattcttcattgttcaattgacgacatcctcaacgattcttcttcggattcc
gatcacgacgcaatttcggtatcatcttctgtttctcaaactaaaaccctaaattccgac
aataaactcttgaattcgacgcaaagtaggtatagtttaatacaaaggttaaaatccgat
gaatttgctgaaaattctagtaggaaaccgccgattccgccgcagaatgtgcggaattcg
tcgattttcggcggcggagttagtaggaagcctggggcggcgtttgcggctgctgctgcg
gcatcgaggaatgttcggatgcctcgtgctgcggtgattaagtcgaggagagctttgagt
gtgagtttggaggggaaggtgtcggatggtgatgaattgttagggtttgttagggatgat
gtgaaatccgagggttgtgatggtgatggcaatgtaagtgaggttgttggagaagtgatt
gaggagagggaggatggtgatgagtctggcagtgtgatggatgttggaaagggggagatg
attgcttcactggagaagcaagaagattcggaattcgaggattcgagtgtcgaacaggtg
attgaaaagagagaggatgatgaaaagttaggtagtgaattagagaaggatggggagtta
gtgtcttgttctgagaagaatgatgatattccggagtgttgggatgtggagaggaaagat
agtgtggattttggggagaagagaatttggcattcgttagatgatgaaggggaagaaagg
attgaggagaagaatgtggttagtttgcatgagaattctgttgatgagggaggtggtttg
tctttagaagttgagaatgagaagaaagaagagcaggattatgggtttgggccgcagcaa
gtacaggaaagtgagaagagtttgctggttttaaatagtgatgaatttggttctggagga
gatgagggctctggaagtgatgaggttaaggagcttgggcttgctgaggataggattgct
caactagagagcgagattgatagtacaaagacagaggagaagttatttcctgttaagaag
caactagaattagcggaagaacttgagataaaacaagcttctacgggtcaggattgggag
gagggggcagctgcgcagcctatgaggttggaaggtgtgcgcagaggttcgactgttctg
ggatattttgatgtaaatgctgataatccaattagtcgagctattaaatctcaagcattt
atccgtgattatggtacctcacaggtcattgcagtgcatctcaattacattgctttgggg
atgtctaagggtgtcgtcgtcgttgtgccaagtaaatattctgcacatcttcctgataac
atggatccaaagatgttgttgcttggtgcacatgccgaccgatccccagtacctgtaact
tctatttgtttcaatcagcaaggggatcttcttttagcaggttatggtgatggtcttatt
acattgtggaatatatctaggggaactgtagctagggttgtcactggagagcatgctgcg
cctgtggtacatacactatttctagcgcaggattttcaagtaactcgccaatttaaagcc
gttactggtgattgtaaaggacatgttcagctacatgaattctcctatgtgccaataatt
ggggtgacagtcaaaacactgtgtcttcttgatggtcaaaggacgggcacagtgttgtgt
gcctcaccactcctacctgatgaatttactttctcaggcaacaccacaggctcaggaagc
agcataggtggtgtcatgggtggtgtagggggagcatccccttggaaattcttcaatgaa
ggttcctccttgtctgaagaaggtgtggtcatctttgtcacccatcagactgctctggtg
gtgagacttaaacctagcttggaagtctatgcacaactttctaggccagaaggcgttcgg
gagggttctatgccatacactgcttggaaatgtacaacaaagtcacggggttcctccaca
gaaaatgtgaatgctgaagcattggagaggatctcactgcttgctatagcatgggaccgg
aaggttcaagttgccaagctaataaagtcagaactgaaagattctgaaaagccagaactt
aaagaaagtggaaagtggacacttagagtgtgtggaaagtggactcttgagagcgcagct
gtaggtttggcatggcttgatgatcagatgttggtgattcttacattgactggtcaactt
tgcttgtatacaagagatgggaccttgatccaccaaactagttatgctagcaatgaaact
ggaggagatgatcttatttcatttcacacgtattttaccaatgtgtttggcaacccggag
aaagcttatcacaattgtctagcagtcagaggagcatctatctatatacttgcacccagg
catgttgttgtttctcgccttcttttatggcgagaacgtattgaggtgttgcgcaatgca
ggagactggatgggtgcctttaacatggctatgacattatatgatggccaggctcatggt
gttattgaccttcccagagacttgaacgctatacaggaagctattatgccctatctggtg
gagttgctcttttcatatgtagatgaggttttctcctatatttcagttgcctgcttcaac
cagattgacaaagaagaagaggcggataattctctcacaaatagcaatgctgcatcttct
gaaataaaagagcaatttacccgtgttggtggagtagcagttgaattctgtgttcatatt
agaaggactgacattctttttgatgaaatatactcaaaatttgtagcagttcagcataga
gatacatttttggagcttctggaaccctacatattaaaggatatgcttggatcactgcct
cctgagattatgcaagcactagtagagcactacaacagcaaaggatggctgcagcgagtg
gagcaatgtgttcttcacatggatatttcatccttggattttaatcaggttgtgaggcta
tgtagagagaatggtttgtatggtgccttgatataccttttcaacaaagggctagatgat
ttcaagactcctttggaagaattattgaatgtgttaagaaatcataaaagagatgctgct
actgctgctgttgggtaccgaatgctagtttatctgaagtattgctttttgggccttgct
tttccaccaggacatggaaaactcccttctgagcggctcccttctcgtaggatggagctt
ttacaatttctgctgcaggattctggtggctcaaagtcacagacaggcgcaagcttaact
tcaactggagctttcctgaacttgcattatctactagagttggatacagaggctacatta
gatgttttaagaatgtcgtatctggaggatgagcaatccaagcttgataattctctgcct
aattctccagatgccactgatgacaatccgattgataatgaattaattgctggtgatcag
gatatgctggttcagaaaattgttgatgctctagttattgttcttgatgtaaatatttct
cagtcagtcagatctacgggcgatgatgatgctagtatggttgtatggccttcaaagaaa
gatataggttacctcattgagtttgtggctagttatgttgcatgtaaaagagctaatgta
tcaaagagtgtgttgagccaaatattggagtacctcacttcagagaatcatcttgcactt
gatgaccgtgaacagaaacatgaatctaaaaaaacaagggagaaaaaagtacttgctctg
ttgggcgcagttcctcaaacagagtggaatgcatcctatgtcctgcatctgtgtgaaaaa
gctcaatttcaccaggtttgtggcttaatccacaccatcagacataattatcttgctgct
ttggattgctatatgaaagatgtggatgaaccagtgcacgcattttcatttattgatggt
atattactgcagctcagtgaaactgagtctgctgctttccaatcagcagtcattcctcgg
atttcagagctagtcactttgagcagagaattcacattttgcttggtgatttatcactta
aacaaagaaaggggacatattctgtctaatcttcaatcaaccccaagaagccttttcctt
tatcttaagactctttttgaggtttatcattcaggcgccctcaacttttcttgtatagag
ggggatggtatctttgatggtccctggggcagacaaaatgatgggaatattactctggca
gcttacctagaaagaatttctgaatttccgaaaataatacaaaataaccccgttgaagtg
aatgatgacatcgttgaactatacctcgagctgttatgtcagtttgaacctgattcagtt
ctcaagtttctagacacttttgaaaattatagagttgatcgctgtttgttgttgtgccaa
aaatatgaaatcgttgatgctgcttcgtttttattagaaagggtgggtgatgttggaagt
gctcttctgcttaccctctctggactcaatgataaatacatcatgcttggtacggcagtg
ggaaatacaatttcagacatggatgtaggcaaatatatacataaggattgctttgctgct
gcttttgggttgaaagaggtacaagacattaaaaaagtactacattcatgtattggcctt
tgccaacgcaactcacctcgtttgaatccggaagagtctgaatcgctttggttccatgtg
ctagactcgttttgtagacccttacttatttctcaaggtaactctgaaaatggcattgta
actcagtcttcaaactttaaagatgacttggaggccaattccgtctcatggacgatttac
aggactcagaaatgtgctcctgttctgaagagaatattttctgaatttgttaaggaaatt
gttgaggggatgataggatatgttcgccttccatctatcatggcaaaactcctgtcagat
aatggaagccaggaatttggtgattttaagctgaccatattaggaatgctgggaacatac
agctttgagaggaggattctggataccgccaaatgcttgatagaggatgatacattctat
accatgagtttactcaagaaaggtgcttcaaagggttatgcccctcgaagtcttcagtgc
tgtatatgtaattgctccttcaagagctcttcaaattttggaatccgggtgttcaattgt
ggtcatgcaacccatatacaatgtgatgttcaggagaatgctacaagtagtcaaagttcc
tctggtggatgtccaatatgtgtgcataaaaaaaagattcggaaagcaaaaggtaagatg
gcagaactaggtttagtgagtgcttcaccgtctacttcccgacgagcgcagagcacaagt
attcttcaccctcatgaactggatgtatttgaaaactccactggccctcaaacttcaaga
tttgaaatcctgaataggcttcagaagaaccagagattggttacttatgataccatgccc
cagctgaggttagcacctccatctgtttaccacgaaaaagtaaacaaaagaaatcatttt
acagcagggggaagtagagaaggcttgatggattctgaaaagcctagtagaaataagcaa
ctccgagatctcaaagtaaaaggttcatcagttaggttcccgctcaaatcaaaaatattt
ggcaaggagaagactcgtgtcaactaa
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integrated database retrieval system
