Chenopodium quinoa (quinoa): 110731668
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Entry
110731668 CDS
T05764
Name
(RefSeq) endoribonuclease Dicer homolog 1-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110731668
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110731668
microRNA pathway
RISC loading complex
110731668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
dsrm
DND1_DSRM
Helicase_C
PAZ
DEAD
ResIII
Dicer_dsRBD
SNF2-rel_dom
Dicer_PBD
SWI2_SNF2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110731668
NCBI-ProteinID:
XP_021767240
LinkDB
All DBs
Position
Unknown
AA seq
1977 aa
AA seq
DB search
MEEGNKGSDDSRPNYWLDACEEEDDIIPCEFIGDFGDFGTGNQSEIASIDPNFFGGIDHI
LDSIKNGEGLPCNDGMDITPSKDLQVENFVVNCNVEVQSSLIGDSKMADVDNGNNNNNFN
NINNNGSVCVKLNGGDGTNKGVTDHVRTSNGDSNVLSDRESCKVDRDRDSEERSGKRTRV
SNGFREERGYSSRGQSCVRDWESNGRKRNREFEETGRRDRDKGRDRERERDRDLGGRRKD
YYNGRRDSRDREWRDREAKGYWEREKPGSNEIVYRVGSYESARNRDTNKVESEKNKECSA
KVEKNEGSFKEKNLEERARHYQLEVLEQAKQKNTIAFLETGAGKTLIAVLLIKSICNRLQ
QQNKKVLAVFLVPKVPLVYQQAEVIREQTGYSVGHYCGEMGQDFWDTRRWQREFESKQVL
VMTAQILLNILRHSIIKMECIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGM
TASPVNLKGVSSQVDCAVKIRNLETKLDSVVCTIKDRRELEKHVPMPSEIVVEYDKAASL
LYLHEQIKQMEVAVEEAARASSRKSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI
QKLRAVNYALGELGQWCAYKVAHNFLVALQSDERANYQLDVKFQESYLSKVVALLQCQLS
EGAASNKDASSIEDNNGCHQDNGSVDEVEEGELPDCHVVSGGEHVDIVIGAAVADGKVTP
KVQSLVKVLMKYKHTDDFRAIIFVERVVAALVLPKVFAELPSLSFIKCASLIGHNNSQEM
RTSQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP
GSDYILMVERGNLSHETFLRNARNSEETLRKEAIERTDVSHLKGTSRLISAENAPGSVYQ
VASTGATVSLNSAVGLIHFYCSQLPSDRYSILHPEFIMVKHEKPDGSTDYSCRLQLPCNA
PFEKLEGPVCSSIRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEDGEKIERNDEGDPL
PGTARHREFYPEGIASILRGEWILSGRDGCDDSKLCHLYMYAVKWEHVGSAKDPFLTQVS
DFSVLFGSELDAEVLSMSMDLFIARTMKIKASLVFRGSIDVTESQLASLKSFHVRMMSII
LDVDVEPSTTPWDSAKAYLFVPMVGDKSVDPLKEIDWDLVENITSTDAWNNPLQRARPDV
YLGTNERSLGGDRREYGFGKLRYGMAFGQKSHPTYGIRGAVAQYDVVKASGLVPGRDYGL
QANFELPKGNLMLADTCINAEDLVGKIVTAAHSGKRFFVDSVRYDMTADNSFPRKEGYLG
PLEYSSYADYYKQKYGVELIYKKQPLLRGRGVSYCKNLLSPRFEHSEEYEGESEETLDKT
YYVYLPAELCFVHPLPGELVRGAQRLPSIMRRVESMLLAIELKNIINYPVPASKILEALT
AASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTQMRQQMVSNMILYHHALE
KGLQSYIQADRFAPSRWAAPGVLPVFDEDVKEEESSLFDQEKSLAKTGLELDVNNFDDDE
MEDGELESDSSSYRVLSSKTLADVVESLIGVHYVEGGKVAANHFMKWIGIEIEFNPEDIE
CPKRPSTVPEGVLRSVDFDGLEGALKIQFRDRALLIEAITHASRPSSGVACYQRLEFVGD
AVLDHLITRHLFFKYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSTALEKQI
RDFVKEVQNEYSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGHNTAVVWRVFQPLL
QPMVTPETLPMHPVRELQERCQQQAEGLEYKATRDGNLATVEVYVDGIQIGVAQNPQKKM
AQKLAARNALLALKEKETAEAMDKAEEAEKKKKNSGQTFTRQTLNDICLRRNWPMPLYRC
VNEGGPAHAKRFTFAVRVNTTDKGWTGECIGEPMPSVKKAKDSAAALLLELLNKWYS
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaggaaataagggttcggatgattcaaggccgaattactggcttgatgcttgt
gaggaggaagatgatatcatcccttgtgaatttattggggattttggcgatttcgggacc
gggaatcagagcgaaattgccagcattgatcccaacttctttggtgggattgatcatatt
cttgatagtatcaagaacggtgaaggattgccttgcaatgatggtatggatattactcct
tctaaagatttgcaagttgagaattttgttgtgaattgtaatgttgaggttcaaagttca
ttaattggtgacagcaaaatggctgatgttgataatggtaataataataataattttaat
aatatcaataataatgggagtgtatgtgtgaaattgaacggtggtgatggaactaataag
ggtgttactgatcatgttagaacaagtaatggggactcgaacgtgttgagtgatagagag
agttgcaaggttgatagggatcgagatagcgaggagaggagcggaaagaggactcgtgta
agtaatgggtttagagaggagagggggtattcgagtcgtgggcagagttgtgtgagagat
tgggagagtaatggaaggaagaggaatcgagaatttgaggagactggacggagggatagg
gataagggtagggatagggaaagagagagggacagggatttgggtggtaggagaaaggat
tactataatgggaggagagatagccgagatagggaatggagagatagagaggcgaagggt
tattgggagagggaaaagccagggtcaaatgaaattgtgtatcgcgttggttcatatgaa
tctgcacgaaatagagacacaaataaggtggagtctgaaaagaacaaggaatgcagtgca
aaggttgagaagaatgaggggagttttaaggagaaaaatttggaggagcgggcacgccat
tatcagttggaagtacttgagcaggcaaagcagaaaaatactattgctttcctggagact
ggagccggtaagactttgattgctgttttacttattaaaagcatctgcaatagattgcag
cagcagaacaagaaagtgctggctgttttcttggtgcctaaggttcctctagtttatcag
caagcagaagttatacgtgagcaaactggatacagtgttggtcattactgtggtgagatg
ggtcaagatttctgggatactcgaagatggcaacgcgagtttgaatctaagcaggttttg
gtcatgactgctcagattttgttaaacattttaaggcatagcataatcaaaatggaatgt
atacatctccttattctcgatgagtgtcaccatgccgtcaagaagcatccatattctcta
gtgatgtctgaattttatcacacaactccaaaggaaaaaaggcctgctgtttttggaatg
actgcttcccctgttaacttgaagggtgtttccagtcaagttgattgtgctgtcaagata
agaaacctagagactaagttggattccgtcgtttgtacaataaaagaccgtagagaactg
gagaaacatgttcctatgccatcagaaattgttgtggaatatgacaaagcagcttcattg
ttatatctgcatgaacaaatcaaacaaatggaagtagcagttgaagaagctgcacgagca
agttcaagaaagagcaaatggcagtttatgggagctagagatgcaggagccaaggaagag
ttacgccaggtctacggtgtctctgaaagaactgagagtgatggtgctgctaacttgatt
caaaaattaagggctgtcaactatgcacttggtgaactgggacaatggtgtgcttacaag
gttgctcacaattttttagtagccttacagagtgatgagagggcaaactaccagcttgat
gtgaagtttcaagaatcttatttgagcaaggtcgttgcacttttacagtgtcagctatca
gaaggtgccgcttccaacaaggatgccagcagtatcgaagataataatggctgccatcaa
gataatggcagtgttgatgaggttgaggagggagaacttcctgattgtcacgttgtctct
ggtggagaacatgttgacattgtcattggagctgctgtagctgatgggaaggtcaccccc
aaggtgcagtcactggttaaagtactaatgaagtataaacacactgatgactttcgtgca
atcatctttgttgagagagttgtggctgcattggttcttccaaaggtttttgctgagctt
ccatctttaagttttatcaagtgtgcaagtttgattggacacaataatagtcaggaaatg
cggacatcacaaatgcaggatacaatagctaaattccgagatggtcgtgtgactttacta
gtcgctactagtgtcgctgaggaaggtcttgatatccggcaatgtaatgtggtgatccgc
tttgaccttgcaaaaactgttttggcatacattcaatctaggggccgtgcaagaaagcca
ggatcagattatatcttgatggttgaaaggggaaacttgtctcatgaaacatttctaagg
aatgctagaaatagtgaagaaactttgcggaaagaagcaattgagaggactgatgtaagt
catctcaagggtacttcaagattgatttccgctgaaaatgccccaggttcagtgtaccag
gttgcttcaactggtgccactgtgagcttgaattctgctgtaggcctaattcatttttac
tgttcgcagctacccagtgatagatactcaatacttcatccagaatttatcatggtgaag
catgagaagccagatggatccacagattattcttgtaggcttcaactaccgtgtaatgcc
cctttcgaaaagcttgagggcccggtatgcagttcgattcgtcttgcgcaacaggctgtt
tgcctggctgcttgtaagaagcttcatgagatgggggcatttactgacatgctcttgcct
gataagggaagtggtgaagatggagaaaagattgagcgaaatgatgaaggagatccactt
ccaggaacagccagacacagagaattctatcctgaaggaattgcctcaatccttaggggg
gaatggatcttgtctggcagagatggttgtgatgattccaaattatgtcatctctatatg
tatgctgtaaaatgggaacatgtagggtccgcaaaggatccattcttgacccaagtttca
gatttttcggtactttttggcagtgagctggatgcagaggtgttatcgatgtcgatggat
ctctttatcgctcgaaccatgaagattaaggcatctcttgtctttcggggttcaatagat
gtcacagaaagccagctagcatccctgaagagtttccatgtgagaatgatgagcatcata
cttgatgtggatgttgaaccttctacaactccgtgggattctgcaaaggcttatctattt
gtccctatggttggcgataaatctgtagatcctttaaaagaaatagactgggatcttgtt
gagaatataacaagtacagatgcgtggaacaatcccttacaaagggctcggccagatgtt
tacttgggaacaaatgagcggagtctgggtggggataggagagagtatgggtttgggaaa
ctgcgttatggcatggcatttggacagaaatcccatcctacgtatggtatcagaggagca
gttgcacagtatgatgtagtaaaggcttctggattggttcctggccgggattatggttta
caggccaattttgaacttcctaaaggaaatttaatgttggctgatacctgcatcaatgca
gaagacttggtggggaaaattgtgacagctgctcactctggaaagaggttttttgtggat
tccgtacgttatgatatgactgcagacaactcattccctaggaaagaaggttatcttggt
cccttggagtatagttcatatgcagactactataagcaaaagtatggagtcgaattgatc
tataagaaacaacctttacttagaggtcgtggtgtttcatattgcaagaatctcctatcc
cctagatttgaacattctgaagaatatgagggtgaatctgaggagacccttgacaaaact
tattatgtgtatctgcctgctgaattgtgttttgtgcatccacttcctggcgagctagtt
cgaggagctcaaagacttccgtcaataatgagaagggtggaaagcatgttacttgctatt
gaacttaaaaatatcatcaactatcctgtacctgcttccaagattctggaagctttgact
gcagcctcttgtcaagagactttctgttatgaaagagctgagctcttgggagatgcttat
ttgaaatgggttgttagtagatttctttttcttaaatatccccaaaaacacgagggtcag
ctcacacaaatgagacagcaaatggttagtaatatgatattataccaccatgcacttgaa
aaagggcttcagtcgtatatccaagcagatcgctttgcaccgtctaggtgggctgcccct
ggtgttcttccagtttttgacgaggatgtcaaagaagaggaatcatctttatttgatcag
gaaaagtctcttgcaaagacgggtctcgagttagatgtcaataactttgatgatgatgaa
atggaagatggtgaacttgaaagtgattcaagttcgtacagggtcctttctagcaagaca
ttggcagatgttgttgaatcactcattggagttcattatgttgaaggcggaaaagtagct
gctaatcacttcatgaaatggattggaatagaaatagagttcaatcctgaagacattgag
tgtccaaagaggccaagtactgttccagaaggtgttctaagaagtgtggatttcgatgga
ttagaaggtgctctaaaaattcaatttcgagacagggcattgttgattgaagcaattact
catgcttcacgtccatcttctggagtcgcctgctaccaacgactagagtttgtaggtgat
gcagtcttggatcatcttataactaggcacctatttttcaagtatacagatttgccccct
ggacgtttgacagatttgcgtgctgcagctgttaataatgaaaattttgctcgagttgca
gttaaacacaagcttcatgtgcatttacgacatgggtctactgccttggagaagcagata
cgggattttgtgaaggaagttcaaaatgaatattcaaaacctggatttaattcatttggc
ttaggagattgcaaggccccaaaagttctaggtgatattgttgaatcaattgccggagcc
atttttcttgatagcggtcataatacggcagttgtgtggagagtttttcagcctttattg
caaccaatggttactcctgaaacacttccaatgcatcccgtgagagagttgcaagaacga
tgtcagcagcaggctgaaggtctggaatacaaggccactcgagatgggaatttagccact
gttgaagtttatgtcgatggtatacagattggggtggctcaaaatccacagaaaaagatg
gcacagaaattggctgctcgtaatgctctacttgctttaaaggagaaagaaactgctgaa
gccatggataaagctgaagaggccgagaaaaagaaaaagaacagtggacaaacatttaca
agacagacattaaatgatatttgtttacgtagaaattggcctatgccactctacagatgt
gtgaacgaaggcggccctgcacatgccaagaggtttacatttgcagtccgtgtaaatacc
acagataaaggttggacaggtgaatgcattggagagcccatgccaagtgttaagaaggcc
aaagactcagctgcagcacttctgttggagcttctgaacaaatggtattcatga
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integrated database retrieval system
