KEGG   Chenopodium quinoa (quinoa): 110732944
Entry
110732944         CDS       T05764                                 
Name
(RefSeq) putative CCR4-associated factor 1 homolog 8
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110732944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110732944
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110732944
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     110732944
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 110732944
NCBI-ProteinID: XP_021768622
LinkDB
Position
Unknown
AA seq 302 aa
MDSTLSITQVRLNNYDEEMKNLTDLLALYNNVCIDTRFTPFLCVTPRGATELMRYEDMKY
NTGNCKLFQVGLSLCDDEGKIGFRNIVEKFHGKIKWVTFHGMYDLAFLISSVLGLSIPST
KDQFLELVKRVFGRFYDLKAMVKHYENYLGPLSEYVLGLGKVTQMVGFKLLGKRHHAGSD
SLATAQLLSKFFEWDLKGYSRFENFQDYTKFEGILYGLSPSQISNATDIQEAVHMRHHNT
MYLPNAPMVFYAPRSPFSRIQAPPHKVVRDVLGIPYVVYGNVPSMVHAPSSSVVVSSIPL
CC
NT seq 909 nt   +upstreamnt  +downstreamnt
atggattcaacattatcaatcactcaagtacgattgaataactacgatgaagagatgaaa
aatctaactgatttattagcattatacaacaatgtttgtattgatacgcgcttcactcca
ttcttatgcgttacaccacgaggtgcaaccgagttgatgagatacgaagatatgaagtac
aacaccggcaattgcaagttgtttcaagtcggattaagtctatgtgatgatgaagggaag
ataggatttcgtaacattgtggaaaaattccatggaaaaatcaagtgggttacatttcat
ggtatgtacgacttagcgttcttgattagtagtgtgctcggattgtcgataccaagtacg
aaagaccaatttcttgaactagttaagagggtttttggaaggttttacgatcttaaagca
atggttaagcactatgagaactacttgggtcctttgagtgaatatgtgttaggattgggg
aaagtgactcaaatggttgggtttaaactactcggaaagcgtcatcatgcagggtcggat
agcttagcaacggctcaacttctaagcaagttctttgaatgggatttgaagggatactct
cgcttcgaaaattttcaagactacacaaagtttgaagggatactctacggcctatctcca
tctcaaataagtaatgctactgatattcaagaggctgttcatatgcgtcatcataataca
atgtatcttcctaacgctcctatggtcttctatgcgcctcgtagtccattttcgaggata
caagctccgccgcataaggtagtaagagatgtattgggcatcccttatgttgtttatggt
aatgtgccctctatggtacatgctccatcatcaagtgttgtagtttcttcaattcccttg
tgttgttaa

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