KEGG   Chenopodium quinoa (quinoa): 110733045
Entry
110733045         CDS       T05764                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03018  RNA degradation
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110733045
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110733045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110733045
   03041 Spliceosome [BR:cqi03041]
    110733045
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110733045
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110733045
Spliceosome [BR:cqi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110733045
 Complex C
  U2 snRNP components
    110733045
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 110733045
NCBI-ProteinID: XP_021768756
LinkDB
Position
Unknown
AA seq 93 aa
MLFFSYFKEIVGREVVVELKNDLAIRGTLRSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDVELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgctattcttttcgtatttcaaggaaatcgtggggcgtgaagtggttgtggaactgaag
aatgatctcgcgataaggggcaccctccgttctgttgatcagtacctcaatatcaagctg
gagaacactagggttgttgaccaagacaagtatcctcacatgttatcagtgagaaactgc
tttattagaggttcagttgtgagatatgttcaattaccaccagatggagttgatgttgag
ttacttcatgatgctactagaagagaagctcgcggcgggtaa

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