Chenopodium quinoa (quinoa): 110733050
Help
Entry
110733050 CDS
T05764
Name
(RefSeq) SAC3 family protein B-like isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110733050
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
110733050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
110733050
NCBI-ProteinID:
XP_021768761
UniProt:
A0A803M7J2
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MSFGFGKNSGPIAPPSGPTSFGSFSRPQSPTSSPPPFPDTGFSAGPGPRFPSPRTFDAHT
RTRPPSLIDNGHNARLVTSPSQPYAAPARAPLLHRGDKQIPLAGDFGNQSNKRPFPSTPQ
DLGTTTSSKFPHFQNPERSRTPPIRYDDDFLQDPASNIMERNADVSSDYHDRVTTQRRQS
PSSTIAASPSIIHPQPSWSNSQRPVTSSQTWGVPGRPVGRTTSSQNERSISPTKNVNTWS
SKELSPEDDFQRNSYVHREVSRRPSLSPPKSRIGMSSGQLPDSQYNHQLSPSVDRMNGDT
YMTKPASHSVSKRTRSPSSSAGQIIQMNSNPTEDDTDREEQAKAKRLARFKTEHDIVESE
RGDTIQRGQNVTKGKVPSITDRSVVEKQKSLGDLPSGSLENQDIDNEDLLSSSAIVGLCT
DMCPESERGERERKGDLDQYERLDGDRNQTTETLAVKKYNRTAEREAELIRPLPILEKTM
DYLLGLLDQPYDDRFLRLYNFMWDRMRAIRMDLRMQHIFNERAITMLEQMIRLHILAMHE
LCEFSKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKRGIFIPTEKEFRGYYALLKLD
KHPGYKVEPSELSLDLANMTVEIRQTLDVLFARDVARSCRTANFVAFFRHARKASYLQAC
LMHAHFSKLRTQALASLHSGLQNNQGIPVAQVAKWLGMEGEDIESLLEYHGFLIKEFEEP
YMVKEGPFLNDDKDYPTRCSTLVHRKKSDTIVKDVLSSHQVTLLPSEPRKELQSDKQRKN
NHAAVKPLQTRIPLVSDDGLMDIEAVSSPIRNIQDQPSLEISTNMISRDIQSFMDPRHMV
SAKSPKENIDTFASFQSNSMLNQPSPLSPRHGSFIADAGQLSFKEPPKSFPVQPFVPVAN
SSNFVWTRQDNFIEPVKSSLEVVVQSEPKSVRPEVVPAYVVKVPTPVSETDSSVVSSIQD
NVSMKEMPSEELYDMQQKVDVDIVENYDEEVAEAKLRLLLRLWRRRSVRKKFIREQNRLA
ANVALSSLSLGPPIWQNQDKPTPCQKLNIDQAMNERYEKSQLSLVRWNVSDLVASKLAEK
NENVNCICWKVISFSWLQHGMEARSPVSHLSLDEWLRYKLIPARKEESVENLVISAPGLS
VWRKWDSDESGDLRCCLSVVKETQPGAFEKNLVGVNAILFPISETLPWDTQKAQLNNLVT
LLPAGACIPLLITSGSGEANFAEVSCSIVDNLGLEDLDKSRVSNFMVFRLIEEGQGQFHG
FFSDQKLKEGLMWLASESHSQLGLFCVTIREVVSFHLNSCLDALDLMGDKVGPYQCISAF
NQALDQSINNITTAANMNPTGWPCPELSLLDDATAEFKAMKQFLPTLGWSSPEEVEPLIS
ALRNCMLPPFPDDLSWLSRGCSSEKDIEDQNHFLQDCLIRYFTQSVNMLNLMMATKEALL
MVQKYTRLELHDTEYKVVPNWVLIFRRVFNWYINSSASFSCKAYILEESLSAGSPLFFDK
LELEVPKSHYITHPSLDEMVEVSCSPIVSKRIRSSPKALQKVAAIASSENTFGITVPDLE
EERNHCSDIHTVEYSDIYPRKNNTPLVLEDEKRADRLSQLLDQCNVLQDDIEKKLSIYF
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttggattcgggaagaattcagggccgattgctccaccaagtgggccaacctct
ttcgggtccttctctcgtcctcagtcgccgacttcgtctcctcctccctttccggacacc
ggtttctctgccggtcccggtccacgattcccgagcccccggacgtttgatgctcatact
agaacacgaccaccttctcttatcgataatggccataatgctcgtctagtaacaagtccg
tctcaaccatatgctgcaccagctagagctcctttgttgcataggggtgataagcaaatc
ccattagctggagattttggtaaccaaagtaataagagaccttttccatctactccgcaa
gatcttggaacaaccacgtcttctaagtttccacactttcaaaatccggaaaggtccaga
acacctcctattcgatatgatgatgattttctgcaagatcctgctagcaatatcatggaa
cgcaatgcagatgtttcctctgattatcatgaccgtgtaactacacagagaaggcagtca
ccttcttcaactattgctgcaagtccttcaataatccatccccaaccttcttggagtaat
tctcaaagacctgttacatcttctcaaacttggggtgtccctggaagacctgttggccgc
accactagctcacaaaatgaaagaagcatttcccctacaaaaaatgttaatacttggagt
tcaaaagaactgtctcctgaggatgattttcagaggaattcttatgttcaccgagaagtt
tctagaaggccctctttgtctcctcctaagtcaaggattggaatgagtagtggtcaacta
cccgattcacaatataatcaccaactatcgccatctgttgatagaatgaatggcgatact
tatatgaccaagcctgcgagccactctgtttctaagcgaactagatcacctagctcttct
gctggtcaaattattcaaatgaactccaatcctactgaagatgatactgatagagaagaa
caagccaaggcaaagcgattggctcgctttaagactgagcatgacatagttgaaagtgaa
cggggtgacacaattcaacgtggtcaaaatgtcactaagggaaaagttccttcaataact
gatcgttctgttgtggaaaaacaaaaatctttgggagacttaccttcaggatcattggaa
aaccaggatattgataatgaagacttgctatcaagcagtgctattgtggggttgtgtact
gatatgtgtccagaatcagagaggggtgaacgagaacggaaaggagatcttgatcaatat
gagagattggacggggatagaaatcaaactactgagacactcgctgttaagaagtataat
agaactgctgaaagggaagcagagttgattcgccccttgccaatattggaaaagacaatg
gattatcttctagggttgctagatcaaccttatgatgatagattccttcgcttgtacaat
ttcatgtgggataggatgagagcaatacgaatggacctgagaatgcaacatatctttaat
gaaagggccataactatgctggagcaaatgatccggcttcatatactagctatgcatgaa
ttgtgcgaattctcaaaaggagaaggcttttctgaaggatttgatgctcacctcaatatt
gaacagatgaacaaaacatctgtagaattatttcagatgtatgatgatcacaggaagaga
ggaatctttattcctactgaaaaggaatttcgtggttattatgctctccttaaactggac
aaacatcccggttacaaagtagaaccttcagagctctcacttgatcttgctaatatgacg
gttgagataaggcaaacactagatgttctatttgcacgtgatgttgcgagatcctgtaga
actgccaattttgtagctttcttccggcatgcaaggaaagcaagctatcttcaagcatgt
ctaatgcatgctcacttctcaaagttgaggacacaggctcttgcttctctacactctggt
ctgcagaataatcaaggtatccctgtggcacaagttgccaagtggcttggcatggagggt
gaggacattgagagcctcttggagtatcacggattcttaattaaggaattcgaagagccg
tatatggtgaaggaaggtccatttctgaatgatgataaagattatcccactcggtgttca
acacttgttcacagaaagaaatctgataccattgttaaggatgtattatcttcacatcaa
gtaacactgttgccatctgagcctagaaaggagcttcagtcagacaagcagagaaagaat
aaccatgcagcagtgaaacctttacaaacaaggattcctcttgtttctgatgatggactg
atggacattgaagctgtttcatcaccaatacgtaacatacaagaccaaccaagtcttgaa
atatcaacaaacatgatatcacgtgatattcaatctttcatggatccccgtcacatggtt
tctgcaaaatctccgaaagaaaacattgacacttttgcaagttttcaaagtaatagcatg
ctgaatcagccttctccattatccccaagacatggctcttttattgccgatgctggtcaa
ttgagctttaaggaacctccaaagagtttccctgtacaaccatttgttccagttgccaac
tcatccaattttgtatggacaaggcaggataacttcatagaacctgtaaaaagttctctg
gaggttgtggttcaatctgaacccaaatcagtacgaccagaagtggtgcctgcttatgtt
gtaaaagtgccaacacctgtttctgaaaccgattctagtgttgtgagctcaatacaagat
aatgtgtccatgaaagaaatgccaagcgaagaattgtatgatatgcagcagaaagttgat
gttgatattgttgaaaactacgacgaagaagttgctgaggctaagcttaggctgttgcta
agactatggagaaggcgctctgttaggaagaaatttatccgtgaacagaacagattagct
gcaaatgttgctttaagttcactctctctcgggccaccaatttggcaaaaccaagataag
cctacaccttgccagaagttaaacattgatcaagctatgaatgaaagatacgaaaagagc
cagctgtctttggtgagatggaatgtctctgaccttgtggcgagtaagctggcggaaaaa
aatgaaaatgtgaattgcatatgttggaaggtaatctcgttctcttggttgcaacatgga
atggaagcaaggagtcctgtatcacatttgtcactagatgaatggttgcgttacaagctg
attcctgccagaaaagaggaatcagtggagaatttggtcatttcagctccagggttgtca
gtttggaggaagtgggattctgatgagtctggtgacttaaggtgctgcttatctgtcgtc
aaggaaacacagcctggtgctttcgagaaaaatttagttggagttaatgctatactgttt
cccatatcagagactctcccatgggacactcaaaaggctcagcttaacaatctcgtgaca
ttactacctgctggtgcttgcattcctcttttgattacaagtggttctggcgaagctaac
tttgcagaagtttcctgcagtatagttgataatcttgggcttgaagaccttgataagtca
cgggtcagcaattttatggtatttcgcctaattgaggagggtcaggggcagtttcatggt
ttttttagcgatcaaaagttaaaggaggggctgatgtggttagcctctgaatcacactca
caacttggtcttttttgtgtaacaatacgtgaggtggtttcctttcatctgaactcatgc
ttggatgcgctcgaccttatgggtgataaagtaggtccataccagtgtatctcagccttt
aatcaagctttggatcaatcgattaataatattactactgctgctaacatgaatccaact
gggtggccttgccctgaattgtcattgttggatgatgctactgctgagtttaaagccatg
aagcagttcttgccaactttgggatggagctcacctgaagaagtagagccgttaatatct
gcattaagaaattgcatgctgccaccttttcctgatgacttatcttggctgagcagaggc
tgcagtagtgaaaaggatattgaagatcaaaatcattttcttcaagactgtttgatcaga
tacttcacacaatcagttaatatgttgaatttaatgatggcaactaaagaagctcttttg
atggttcaaaaatacactagacttgagcttcatgacacagaatacaaggtggtcccaaat
tgggtgctcattttccgacgagtatttaactggtatataaacagttcagcgagtttctca
tgtaaagcttacattctcgaagaatctttatcagccggtagtcctctgttttttgacaag
ttggaacttgaagttcctaaatctcactacattactcatccctcgttggatgagatggtc
gaggtcagttgcagcccaattgtttccaaaagaataagatcttcccccaaggctcttcaa
aaagtggcagcaatagcttctagtgagaatacttttgggattactgtgcctgatctggag
gaagagagaaaccactgctcagatattcacactgttgaatactctgatatctatccgaga
aaaaataatacacccttggttcttgaagatgaaaagagagctgataggctgagccaattg
ctagatcagtgtaatgttttgcaggatgatattgagaagaagttgtcaatttacttctga
DBGET
integrated database retrieval system
